Pistacia vera (pistachio): 116111157
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Entry
116111157 CDS
T07386
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116111157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116111157
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
116111157
Prokaryotic type
Archaeal type
TFB
116111157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
zf_Tbcl_2
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
116111157
NCBI-ProteinID:
XP_031253215
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSDAYCSDCKKSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLITAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKLLRDISLATGVAEGTIRNSYKDLYPHVAKIIPNWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgcgtattgttcggattgcaagaagagcacggaggtggtgttcgatcactct
gcgggggacacggtatgttcagagtgcggactggtgctggaatcgcactcgatcgacgag
acgtccgagtggaggacgttcgcaaacgaatcgggcgataacgacccggtccgtgtcgga
ggtccgaccaatcctcttttggccgacggcggcctctccacggttatcgcgaaaccgaat
ggagcttccggcgagttcttgtcgtcgtcgctaggtcggtggcagaatcgcgggtctaat
ccggatcggggtttgattacggcttttaaaaccatcgctacgatgtctgataggttgggc
cttgttgcaaccattaaggatcgggcaaatgagatatataagaaggtggaagatcaaaaa
tctagtcgaggaagaaatcaggatgcgttattggctgcctgcctgtacattgcttgtcga
caagaagacaagccacgcactgtcaaggaaatatgctctgtcgccaatggagctacaaag
aaggaaattggccgagcaaaagaatacattgtgaaacagctggggctggagactggtcag
tcggtggagatgggaactatacatgctggggacttcatgaggcgcttttgttccaatctt
ggtatgaataatcaagcagtaaaagctgcccaagaagctgttcagaagtcagaggagttc
gatataaggaggagccctatatcaattgcagctgctgttatttatattataactcagctt
tcagatgacaagaagctgctccgagatatttcacttgctactggagttgcagaaggaaca
atcagaaattcatacaaggatctttatccccatgtcgcaaaaataataccaaattggtat
gccaaggaggaggatcttaaaaacctttgcagcccataa
DBGET
integrated database retrieval system
