Pistacia vera (pistachio): 116111265
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Entry
116111265 CDS
T07386
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116111265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116111265
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116111265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
116111265
NCBI-ProteinID:
XP_031253320
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MESDLGKLFIGGISWDTDEERLKEYFRNYGEVVEAVIMRDRATGRARGFGFVVFSDPAVA
ERVIMDKHMIDGRTVEAKKAVPRDDQNMVSRNTVSIHGSPGPGRTKKIFVGGLASTVTEN
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR
AVPKELSPGPIRSPMIGYNNYGLNRATNLLNNFAQRYNLSPVGGFGVRMDGRFSPLATGR
TGFSPFGATGYGIGVNMEGGLSPSYGGTSNFGSSLGYGRMLSPYPGGTASRYSTPIGYGG
GAGRNDSVLSSTSWNVWGNGGPNNASNPASPGAYMGTGSGNFGVSFGNSGANWGTVSTPG
GGSASGYASGNMGYGSGDGIYGLGGGGLGRNSSTGVVPTSSFAGSTGGYEGSYGDLYRSG
SAYGDPTWRSATPELDGSSAFSYGLGSITADVAKSSEGFIGSYNVTSRQSNRGIAT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatcttggtaagctcttcattggtgggatttcttgggacacagacgaagaa
cgtctcaaggaatattttaggaactatggagaagtggtggaggcggtgatcatgagagat
cgagccacaggtcgtgctcgtggctttggttttgtggtgttttccgatcctgctgttgct
gagagggtcatcatggataagcacatgattgatggacgcacggttgaagcaaagaaggct
gttcccagggatgatcagaacatggtgagtagaaacactgtcagtattcatggttctcct
ggccctggacgcacaaaaaagatttttgttggaggtttagcttctacagttactgagaat
gacttcaagaagtactttgatcagtttggtacaattactgatgtggtcgtaatgtatgat
cacaacactcaaaggccaagaggttttggcttcattacttatgattctgaggaagcagtg
gatagagttttacacaaaacatttcatgaactgaatgggaaaatggttgaggtcaagaga
gcagtgccaaaggagctatctccagggcccattcgcagccctatgataggatataataac
tatggtctgaatagagccaccaacctccttaataattttgctcagagatataatctgagc
ccggttggaggttttggagttaggatggatgggaggtttagccctcttgcgactggtcgg
actggattttctccatttggtgctactggttatggaataggtgtgaatatggaaggaggg
ttgagcccaagttatggcgggacttccaactttggtagtagtctaggttatggacgaatg
ttgagtccttatcctggtggaactgcaagcaggtatagtacacctattggctatggtggg
ggtgctggaagaaatgattctgttttgagctcaacttcctggaatgtctggggaaatggg
ggccctaacaatgcctcaaatcctgccagccccggtgcttacatgggtactggaagtggg
aatttcggagtttcatttggaaatagtggagccaattgggggactgtttcaactcctggt
ggaggaagtgcttctggctatgctagtgggaatatgggttatgggagtggtgatggcatc
tatgggctgggaggaggagggcttggaagaaacagtagcacaggtgtggtcccaacttcg
tcatttgctgggtcaactggtggttatgaggggtcttatggggacttgtaccgcagtggc
tcagcttatggtgacccaacttggcgatctgccactcctgaactagatggttctagtgca
ttcagttatgggcttggcagtataacagctgatgttgccaaaagttctgagggtttcatt
ggaagttacaatgttaccagtcgacagtcaaatagaggaattgctacgtag
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