Pistacia vera (pistachio): 116111300
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Entry
116111300 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: chaperone protein ClpC1, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvy03110
]
116111300
Chaperones and folding catalysts [BR:
pvy03110
]
Heat shock proteins
HSP100
116111300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
ClpB_D2-small
AAA
AAA_lid_9
AAA_5
AAA_16
Sigma54_activat
nSTAND3
TsaE
AAA_22
RuvB_N
AAA_18
IstB_IS21
AAA_7
AAA_28
Zeta_toxin
AAA_14
AAA_25
DUF815
TniB
AAA_19
Alpha_L_fucos
HerA_C
DUF5906
MazE_antitoxin
SRP54_N
Motif
Other DBs
NCBI-GeneID:
116111300
NCBI-ProteinID:
XP_031253358
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MEKLEKQGPVQLEMLNKYATDLNKMAKEGKLDPLIGRQQELERVIQILCKRRKNNPCLIG
DPGVGKTVIVEGLAQRITNNTSPIYPLDMGRLIAGASNRGEYEERLTKLIDEVKLSEGSI
ILFIDEVHTLIGAGSXGQAVDAADIMKPALARGELRCIGATTFDEYKKYIEKDAALKRRF
QQVLVPEPSVAGTIEILLGLCSKYESHHNVKYTSNALAAAAQLSHQYISDRFNPDKLIDL
IDEAGAKLVIHQTKGSLGTKMLITEDNIKEMVSTWTGIPAEKISSEESHQLLQMEKTLQK
HIIGQAEAVEAISRAIRRARVGIRDPSRPISSFLFTGPIGVGKTELAKALAVEYFGSKDA
MIRIDMSEYMERHTVSKFFGSPPGYVGSVNGGQLTEAVRHRPHSLTLFDEIEKAHCDVLN
IMLQVLDGGRLTDNKGQTVDFKNTIIIMTSNIGGNLIFKKSHLGFDHVEMKVAEXLKKNF
KPEFLNRIDEVIVFRPLSNSQLKEIVEIMLKQVYERLKEKNIKVEVTERFKEEIVKEGYN
PSYGARPLRRAIGSLLEDNLAERILNGSIKQGDSVTIHVDSNGKILVHCKISATFGNGKG
SLQRNIIGQLEAVEGVSRAVRKAKVGIRDLSQPLSSFLFAGSNGVGKTELAKALAVEYFG
GYEDDGQLTEAVYKKPHSVVLLDEMVKAHPIV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacttgagaaacaaggtcctgttcagctggaaatgctaaacaaatatgctaca
gacttaaacaaaatggcaaaagagggcaagttggatcctctcatcggaaggcaacaggaa
cttgaacgtgtcatccaaatactgtgtaaaagaaggaagaataacccatgccttattggc
gatcctggtgttggaaaaactgtaatcgttgaaggcttagcacagaggattacaaataat
acttctccaatatatcccttggacatggggcggcttatagctggggcatcgaatcgagga
gaatatgaggagaggttgacgaaattgatagatgaagtaaaactgagtgaaggatccatc
atcctcttcattgacgaggtgcacactcttataggtgctggttcttgaggacaagcagta
gatgctgctgacataatgaaacctgcccttgcaagaggagaattaaggtgcattggtgcc
acaacatttgatgaatacaagaagtatattgagaaggatgctgccttgaaaaggcggttt
cagcaggttttagtgcctgaaccatcagtggctgggacaattgagattctgctaggtttg
tgctcaaaatatgaatctcatcacaatgttaaatacacatcgaacgctttagcagcagcc
gctcagctttcgcatcagtatatcagtgatcggtttaatcccgacaaattgatagacttg
attgatgaagctggcgccaaattggttatacatcaaacaaagggatcactaggaacaaaa
atgttgataactgaagataatataaaggagatggtctctacctggaccggaattccagcg
gagaaaatttccagtgaagaatctcaccagcttttgcaaatggaaaagactttgcagaag
cacattattggtcaggccgaagctgttgaagctataagccgtgccatccgtagagcaaga
gtgggaatcagagacccaagtcgcccgatatcaagcttcttattcactggtcctattggg
gttggaaaaacagaacttgcaaaagctttagcagtcgaatattttgggtcgaaagacgcc
atgataagaatcgacatgagcgagtacatggagagacatactgtttccaagttttttggt
tcgcctccgggttatgttggctctgtaaatggtggccaacttacagaagctgtacgccac
cggcctcacagtttgaccctcttcgatgagattgagaaggctcattgtgatgtattgaat
attatgcttcaggttttagatggtggtcgtttaacagataacaaagggcagaccgtggac
ttcaaaaacaccattataataatgacctcaaatatcggtggtaatttgattttcaagaaa
agtcatctggggttcgaccatgtggagatgaaagttgcagagtaactgaaaaagaatttc
aagccagagttcttgaacaggattgatgaagtgattgttttcaggccattgagtaactcg
cagctgaaagaaatcgtggagatcatgctgaaacaagtgtacgaaagactgaaagaaaag
aacataaaggttgaagtcacagagagattcaaggaagaaattgtgaaagaaggttataat
cccagctatggagcgaggcctttgagaagggcaattgggagcctcttggaggacaatttg
gcagagaggatattgaatggaagcattaaacagggcgattcagtgacaatacatgttgat
tcaaatggcaaaatattggtgcattgcaaaatctcagcgacttttgggaatggaaaaggc
tctctgcagaggaatataattgggcagctagaagctgttgagggcgtcagccgcgccgtg
cgtaaagctaaagtgggaattagagacctgagccaacctttatcaagctttttatttgct
ggttctaatggcgttggaaaaacagaacttgcaaaagccttggcagttgaatattttggg
ggctacgaagacgatggtcaactgactgaagctgtatataagaagcctcatagtgtggtt
ctccttgatgagatggtgaaggctcatcctattgtgtag
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