KEGG   Pistacia vera (pistachio): 116111709
Entry
116111709         CDS       T07386                                 
Name
(RefSeq) exosome complex component RRP41 homolog
  KO
K11600  exosome complex component RRP41
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116111709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvy03019]
    116111709
Messenger RNA biogenesis [BR:pvy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116111709
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     116111709
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 116111709
NCBI-ProteinID: XP_031253713
LinkDB
Position
Unknown
AA seq 241 aa
MEYVSPEGLRLDGRRPMEMRQLLAEIGVVAKADGSAMFEMGNTKVIAAVYGPREVQNRSQ
QITDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTNLMPLSQIDIF
VQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPD
VTVGILPTLDKVTLLQMDAKLPTDTFEDVMQLATEGCKAVANYIREVLLENTKQLECHRG
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaatatgtaagccctgaaggacttcgattggatggtcgccgccctatggaaatgagg
caactactagctgagattggtgtcgttgccaaagcagatggttctgctatgtttgagatg
ggtaacacaaaagttattgctgctgtctatggcccaagagaggttcaaaataggagccag
caaattactgaccaagcactggtgcgctgtgagtacagcatggctaattttagtactgga
gatcgtatgagaaaaccgaagggtgacaggcgatcaacagagatatctcttgttattcgt
cagacaatggaagcatgcatattgaccaatttaatgcctctttctcagatagatattttt
gtacaagttctacaagcagatggaggaactcgatctgcatgtattaatgctgcaacatta
gctcttgcagatgctgggattccaatgcgtgatattgttacttcttgtagtgctggatac
ctcaatagtactcctcttcttgatttgaattatgttgaagatagtgctggaggtcctgat
gtcactgtaggcattctacctacattggacaaagttactctccttcagatggatgctaag
ttaccaactgatacatttgaagatgtcatgcaacttgctactgaaggctgcaaggcagta
gcaaattatattcgagaagtactactagagaataccaagcagctggagtgtcaccgaggt
tcataa

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