Pistacia vera (pistachio): 116111717
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Entry
116111717 CDS
T07386
Name
(RefSeq) nuclear pore complex protein NUP88
KO
K14318
nuclear pore complex protein Nup88
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116111717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116111717
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116111717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
DUF7265
Motif
Other DBs
NCBI-GeneID:
116111717
NCBI-ProteinID:
XP_031253722
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MVFLICSVFHSLGFSNARQFIFNGPGLILFPETQPAHNAQLQKRRRFTNLTTSAELILLP
WPCQSSSVSDIKPNSKIHSQNLSKDNCRMRFNFDFSEANTDSRRSLTPKEELEWSPLQSH
PVFSAAYGDSSTGKESSGTPKNLVAWDGASRLYYWNSNKGCLHRISIRLGEPDPTSIIAA
SPSKVLQPDVKLNFEVNRISINRNGSALLLAGSDGLCVMYLYGRTCTTDSNTLVCRTVSI
GAQIYFSSSSNAIRILQVSWHPYSETHLGILSSDSVFRLFNLSADLMQPEQEYYLQPVEP
GRSRNAASICPVDFSFGGDHLWDRFTVFVLFSDGSIYILCPIVPFGSVYKWESILEIYSD
AHTFGLRSSNSSAISNSSLAISWLEATFPELAQDAVDEGDLPTLKAHPHALFNSSLSLQG
PLRKVCHGGEDEVLAVRGAECEGRAVSFLYSLVSKDSILVTAWSVGQLQIDALADEIQPV
WIVGNAPRLRVDYHDHILGLAMICEPMSVQFPIVKLDQPVDHTVWLGHPPPLLRLATVDL
ALPRNTDSGSLITMFVDPLMQERIYALHDGGIDSIVLHYLPFTSQNRGKDETVRTPSVNP
VLSTCQGETSSSSRLCGFVSLSDSFGYSWIVGVTSTHECIVLEMKSWNLLLPIKIDTEKK
PINLGERKETDTPDIISKELLVGPKVVLHPQALPNLRSVAADSIEGRSTLHQYFKLFHEN
YVEYAHKVYFELKHHAPQLMRLIDDQHARLREAQEKISQVEVKQPRLEERIDHAIEIHNS
LEQRLQRLRNLPGAHKKPLSRAEREFKSELDQFTGVELDALHSSIEALRARLRRLTQSPT
KGSTNQQRKTLVKNNVQDAQMSQLKSAMEKLTIVNSENSKKVKLVESALKRQESSR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttttaatttgttctgtttttcactctctcggcttttcaaatgcgcggcaattt
atatttaatggaccgggcctaattttatttcctgagacccagcccgcccataatgcccag
ctacaaaagcgacgccgtttcacaaacctcacaacatctgccgaacttattcttcttcca
tggccgtgtcagtcctcctctgtctcagacattaaaccgaacagtaaaatacactcacaa
aacctaagtaaagataattgcagaatgaggttcaattttgatttctcagaagcaaacaca
gactcgcgccgctcgctcacgcctaaagaggaactcgaatggtcgccacttcagagtcac
cccgtcttttccgccgcctacggagactcctctaccggaaaggagtcatctggaactcca
aaaaatcttgtggcatgggatggagcttctcggttatattactggaactctaacaaaggt
tgcctccatcggatttccattcggctgggcgaacccgacccgacttctatcatcgcagct
tcgccttctaaggtattgcaacctgatgtgaagcttaattttgaagttaatagaatttca
attaatagaaatggctcggctttactactcgctggttcagatgggttgtgtgtcatgtac
ttgtacggacgaacttgtactacagatagtaacacacttgtttgcaggactgtttcgatt
ggtgctcaaatctattttagtagcagcagcaatgctatacgtatactacaagtttcttgg
catccttatagtgaaacccatttggggattctttcctctgattcagttttcagacttttt
aatctgtctgcagatctcatgcaaccagagcaagaatattatctacagcccgttgaacca
ggtcgatctaggaatgctgcatcaatttgccctgttgatttttcttttggtggagaccac
ttgtgggatagatttactgtttttgtattattcagtgatggttcaatatacatcctgtgt
ccgatagttccatttggaagtgtctacaaatgggaatccatattggagatatatagtgat
gctcatacttttggtctaagatcaagcaattcatcagctatcagtaattctagtctggca
atctcttggttagaagcaacatttcctgagttggctcaagatgcagtggatgaaggagat
ctgcctacgctaaaagctcatcctcatgctttatttaattcatcactttctttgcaggga
cctctgcggaaagtatgccatggtggggaggatgaagtgcttgcagttcggggggcagaa
tgtgaaggtcgtgcagtcagttttctgtatagtttagtcagcaaagactcaattttagtg
actgcctggagtgttgggcaattgcaaatagatgccctagcggatgaaatccagccagtc
tggattgtcggtaatgcacctcgtcttcgtgttgattatcatgaccatattcttggactt
gctatgatttgtgaacctatgtcagttcagtttccaattgtgaagcttgatcaaccggtt
gatcatactgtttggttggggcatccgcctccgttattgagattggctactgtggatttg
gccttgcctaggaatacagacagtggttctcttattactatgtttgttgatccccttatg
caagaaagaatatatgcacttcatgatggaggaatagattcaatagtgttgcattatctc
ccatttacaagtcaaaaccgtggtaaggatgagacagtcagaactccttccgtgaatcct
gtcctgagtacatgccaaggagaaacctcgtcttcatctcgtctgtgtggatttgtgtca
ttgtcggattcatttggatactcatggattgtgggagtcacctcaactcacgaatgtatt
gtgctagagatgaaaagttggaacttattgcttcccattaaaattgatacagagaagaaa
cctattaacttaggggaaaggaaagagacagatactccagatatcataagtaaggaactt
ctagttggtcctaaggtggttcttcatcctcaggctttaccaaaccttcgttctgttgct
gctgattctattgaaggtcgatcaactctccatcagtacttcaagcttttccatgaaaat
tatgttgaatatgcacataaggtatactttgagctcaagcatcatgcaccacaattgatg
cgactcattgatgatcagcatgctcgtttacgtgaggcgcaagagaagatttctcaagtt
gaggtgaaacaaccaagattggaagagaggattgatcatgcaattgagatacataatagt
ctagaacagcgattacaacgcttgaggaatttgcctggggcacataagaaaccattgtct
agagctgagagagaatttaagtctgagcttgaccagtttacaggagttgagctggatgct
ttgcattcttccattgaggcattaagagcaaggctgagaaggcttacacaatctccaaca
aagggcagtacaaaccaacaaaggaaaacattagtaaagaacaatgtccaagatgcccaa
atgtcccagctaaaatccgcaatggaaaaactcacaattgtcaacagtgagaactcaaag
aaggttaagcttgttgaatctgcattaaaaaggcaggaaagcagcagatga
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