Pistacia vera (pistachio): 116111948
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Entry
116111948 CDS
T07386
Name
(RefSeq) uncharacterized protein LOC116111948
KO
K24155
rabconnectin-3a
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116111948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvy04131
]
116111948
Membrane trafficking [BR:
pvy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116111948
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
116111948
RAVE complex
116111948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
116111948
NCBI-ProteinID:
XP_031253970
LinkDB
All DBs
Position
Unknown
AA seq
2473 aa
AA seq
DB search
MPEAESSANFRNANHTVDPVDHLPLSLLRSEYIPAAPTRSLSTIDWLPEFAGYSWVAYGA
SSLLVISHFPSPLSQDETLIGPIFRQFFELSDDTTPVSAVSWSPVAPSIGGLAAASGNCI
YVFTHDSGTSKGSFCWSQNAVLIQRTKVEAIQWTGSGDGIIAGGIEIVLWKKQNTSWEIA
WKFKENQPQNLVSATWSIEGPSATAAYMYKPDLGGSNEAGKCVLVCYSDGKSEYAKVRLR
HPQPIAMIQWRPSTRRQFQGDAKHSSRHVLLTCCLDGTLRLWSEMDSRRVKKVGRDINDR
KTMGRSFCVVAVIEVNQALNGDLGMDVFFTWATENTSMFKTSQGDNQFISAGGFERGRAG
KCEWLIGFGPGMLVTFWAIHCLDDINPLRFPRVTLWKKQSLESGNLNRSGFPNFKEQLIL
NKVVILRNCVSGPPTVCSLIHLSPCNSLVWSFLHTQTSKNIEDISPNESQTGNFLSFSAS
RVLNIDGHTGKILQVAVHPCVSEVELAVSLDSNGLLLFWSLSTISNSISAFPTLIPTWKL
CGKLGTQGLCSKYTALSWAPSMLHEERVLLMGHVAGIDCFIVKVSQTEENGISCNYICTI
PLSGHRTYEEGPANIFSIPLPSCNSKTVKYNKFLLLGVWMNGFEALSWEITLHPVDLLER
CCECNVDDNAVKCIMWKFGITTSEKRYCIAVYPRSSQFPEAHTNNQITSFAVVCPSSLIH
VDQKLADDDDLCSKIPAYTMATGSSDGILKLWRSNLGSPSTPDMQWELVGMFVAHQGPVS
TMCLTNCGLKIATVSSKSDSNAGSTLSVWESVYLTGFGSFILEDTLSFDRSVVAVNWLTF
ENGQFLLGVCMENELWIYAQRRCGGQTLLNSKKSFKMQIWLCIAFAHTSPAIHGLFSGRR
ATAIVVHNSYFSLFSRWLFLIDKKHQAKCRSNFVVEEIAEKLRGSLPAYHPEALLINIYS
GNWKRAYVSLRHLVEYLTSNNVSETIYPSTKSGHIVPQILLSNYFEGFLSKGSANSEFKW
NGVDTSMTSSSQFNGGITQFAYNFASVDASTYMVNSSSPKSELGGFVESLENLNGLPAIT
TIEKMEILAVIDLLKEVSNMQSASAYENLDEFGRRFWVALRFQQLHFSRRFGRSASVEEL
VVDSRLIGWAFHSDCQEALFGSVLSNEPSWPEMRALGVGFWFTNMTQLRIRMEKLARSQY
LKGKNPKDCALLYIALNRLQVLAGLFKLSKDEKDKPLVAFLSRNFQEEKNKAAALKNAYV
LLGRHQLELAIAFFLLGGDAASAINVCAKNLGDEQLALVICRLLEARGGPLERHLIAKFI
LPSAIERKDYWLASLLEWELGNYSESFLTLTGFRETTVTNKFAVLSNNAAFVDPSIGLYC
LTLANQNHMKNAIGEKNAAILGRWATLMRATALNRCGLPLEALECLSSSPSTIAVTDQGS
IPDVEHSQIIPAILKPSACDASNWLSGDVALHLESHGKLDLALQYFSKLMWEHPSWPNLG
SDRASTCSMDLETHQHEKILENFQCKLYTGLAYLKQRFALESSCLISMILVLLCNNGLLF
IGYDILRGYTCQGLSQDESNVKDSFLLYYLQHKPLVKATEDFSFFISRFIAASSITCFNL
KPLHIENGLCREVGSACLNAWKHYFECVILSLWSLRAAMRNFSGYLTEELIMEPLVLLDL
YEYYVHFASAWRQRNSKSILLLVQPLLITYTNGHTPYEVNMVNLKKIFHQTAELVACTSI
DNVEGMLQVPKIIDDKKCDLMHSIPEDERWHIMAACLWQHMSRFTKHKLNSISVKLDDNH
STGVMEHIRLLSLILSKSLKSTLLHVSSYHVKQLAIFLQQKVEIGHDVPTCRWLDESKLS
QPGVLYPHLREGAASMYMMNNKDEAVSELLWDACADANMIFEGFVQEKINWQHHIHSKRS
KGWTHINEGVMMDHENEAAHNHGGNSSSTSAGGEVGLPGKGLFRNGHALLSSWQKDTSIV
NEVTPFQSPQEIYRRNGELFETMCINSVDQRQVVVASNRKGIVFFDWEDGLPFRGQAEYI
WSDADWPHNGWAGSESTPMATFVSPGIGLGSKKGARLGLGGATFGLDLSARPARDLTGGG
AFGIPGYAGIGASGLGWEIQDDFEECVDPPATLENISTRAFSSHPSRPFFLVGSSNTHIY
LWEFGKDKATATYGVLPAANVPPPYALASISALQFDHFGHRFASAALDGTVCTWQLEVGG
RSNVRPTESSLCFNSHAVDVTYITSSGSVIAAAGHSSSGINVVIWDTLAPPTSSRASIIC
HEGGARSISVFDNNIGSGSVSPLIVTGGKGGDVGIHDFRYIATGRAKRHRHLDTGELSIN
SSANTDTRTGFGNNPGDQNGMLWYIPKAHLGSVTRISTIPNTSLFLTGSKDGDVKLWDAK
AAKLVYHWSKLHERHTFLQPSSRGFGGVVRAAVTDIEVVSHGFLTCGGDGSVKLVQLKDF
TNFGCEYVEQLLF
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagcagaatcaagcgctaattttcgaaatgcgaatcatacagttgatcccgtc
gatcatcttccactctctcttctccgatccgagtacatcccggccgcaccgacccgatcc
ttatccacaatcgactggttaccggagtttgccggttactcatgggtggcgtacggagca
tcttctcttctggtgatctctcattttccttctcccctctcccaagatgaaaccctaatt
ggtcccatttttcgccaatttttcgagctctccgatgatacaacgcccgtcagtgccgtt
tcttggtctcccgtagctccttcaattggcggccttgctgctgcctcggggaattgcatc
tatgtctttactcatgattcggggacctccaaaggttctttttgttggagccagaatgca
gtactcatacaacgtacaaaggtggaggcaattcaatggacggggtctggggatgggatc
attgctggtggaattgagatcgttttatggaaaaagcaaaacacatcctgggaaatagct
tggaagtttaaagagaatcagcctcaaaatcttgtttctgcaacttggtctattgaggga
ccttctgcaactgcagcttatatgtataaaccagaccttggaggatctaatgaggcaggc
aagtgtgttttagtttgttacagtgatggaaaatctgaatatgccaaagtcaggctacgt
catcctcagcccattgcaatgattcaatggaggccatcaacgagaaggcaattccaggga
gatgcaaaacattcatctaggcatgtgctgctaacatgctgcttggatggaactctaaga
ttatggagtgagatggatagcagaagggttaaaaaagttggcagggacattaatgatcgt
aaaaccatgggacgatctttttgtgttgttgctgtgattgaagtaaatcaggccttgaat
ggagatcttggaatggatgtgttttttacatgggcaacggaaaacacaagcatgtttaaa
accagtcaaggggacaaccaatttatttctgctggaggatttgagcgtggaagggctggc
aaatgtgagtggttaattgggtttggtcctggaatgctggttactttctgggctatccat
tgtcttgatgacatcaatcccttaaggttcccacgagttacattatggaagaaacaaagc
ctggaatctggaaatctaaatagaagtggttttccaaattttaaggagcaactaattctt
aataaagttgttattttaagaaactgcgtttctggtcctccaactgtttgctctttgatt
catctatcaccttgtaactccttggtttggtcctttttgcatacccaaacatcaaaaaac
atagaggatatatctcctaatgaatcccaaacaggaaacttcttgtcattttcagcaagt
agggttttaaatatagatggtcacacgggaaaaatcttacaagttgctgtgcatccttgt
gtctccgaagttgaacttgctgtttctcttgattctaatgggttgctgttattctggtct
ctttctaccatttcaaacagcatctctgccttcccaacgttgattcctacatggaaactt
tgtggaaaacttggaactcaaggtttgtgttcgaaatatacggccttgagctgggctcct
tcaatgctgcatgaagaaagggttcttcttatgggtcatgttgcaggaatagattgcttt
atagtaaaggtttctcaaactgaagagaacggaatatcatgtaattacatatgcactata
cctcttagtggtcataggacttatgaggaaggtcctgcaaatatattttctatacctttg
ccttcttgtaacagtaaaacggtaaagtataataaatttttgcttttgggggtgtggatg
aatgggtttgaggccctatcatgggaaatcaccttacaccctgttgatttactggaaaga
tgctgtgaatgtaatgttgacgataatgctgttaaatgcattatgtggaagtttggaatt
actacttctgaaaaaagatattgcattgctgtctatccccgatcatcccaatttcctgag
gctcacacaaataatcaaattacaagttttgctgtggtctgtccaagtagtctgatacat
gtggatcaaaagttagctgatgatgatgatctgtgcagcaaaattcctgcatatactatg
gcaacaggctcctctgatggtattttgaaactgtggagaagtaaccttggtagcccatca
acccctgacatgcaatgggagcttgtaggtatgtttgtcgctcatcaaggtcctgtttct
actatgtgcttgactaattgtggtctgaagattgctaccgtttcttctaaaagtgattca
aatgctgggagcacactttctgtatgggagtctgtataccttacagggtttggtagtttc
atattggaagatacattatcctttgacagaagtgttgttgctgtaaattggttaactttt
gaaaatggtcaattcttacttggcgtgtgcatggaaaatgagctgtggatatatgcacag
aggcgttgtggtggtcagactttgctgaactctaaaaagtcttttaaaatgcaaatttgg
ttgtgcattgcatttgctcatacttctcctgctattcatggcctcttttctggtcgcagg
gccacagctattgttgtgcacaatagctactttagtctatttagtaggtggttgtttctc
attgataaaaaacatcaggccaaatgccgttcaaattttgttgtggaggaaattgctgag
aagttaaggggatctttgcctgcttatcatcctgaggcactccttataaatatatattca
ggcaattggaaacgtgcatatgtgtctttgaggcatcttgttgaataccttacttcaaat
aatgtctcagagacgatatatccctccacaaagtctggccatattgtcccacagatcctt
ttgtcaaattattttgaagggtttctctccaaaggttcagccaatagtgaatttaaatgg
aatggggttgatacatcaatgacatcttcttcacagtttaatggaggcattacccagttt
gcttacaattttgcgtccgttgatgcttccacttatatggttaattcatcatctccaaaa
tctgaacttggtggctttgttgagtctcttgagaatttaaatgggctaccagctataacc
accatagagaagatggaaattcttgcggttattgatctactcaaagaagttagtaatatg
caatctgcttcagcctatgaaaatcttgatgaatttggccgaaggttttgggtggcatta
aggtttcagcaactacacttttctcgaaggtttggtagatcggcatctgtggaagagttg
gttgttgactccaggcttataggatgggctttccactctgattgtcaggaagctttgttt
ggttctgttctatctaatgaaccatcttggccagaaatgcgggcactgggtgttggattt
tggttcactaacatgacacaattgcgtataaggatggagaaactggcaagatcacagtat
ctgaagggcaaaaatcctaaagattgtgcacttttgtatatagctttgaatcgacttcaa
gttttggctggcctgtttaaacttagtaaagatgagaaggacaaacccctggtggcattt
ctttcgcgcaattttcaggaggagaaaaataaggcagctgctttgaaaaatgcttatgtc
ttactcggtaggcatcaactagagctggctattgctttttttctgcttgggggtgacgca
gcctctgcgattaatgtgtgtgcaaaaaatcttggggatgaacagctggcgctagtaatt
tgccggctcctagaggcgcgtggtggaccattggagcgtcatcttatcgcaaagtttata
cttccatctgccattgagaggaaagactactggcttgcaagccttctggagtgggaatta
gggaattactctgagtcatttctgaccttgaccggtttccgagaaactactgttaccaac
aagtttgctgtattgtccaataatgctgcttttgtggatcccagtattggtttgtattgc
ctcaccctagcaaaccaaaatcatatgaaaaatgctatcggggaaaaaaatgctgctatc
cttggtagatgggcaactttgatgagagctactgctttaaacagatgtgggcttcctctt
gaagctttggagtgcctttcatcttctcccagcactattgcggttacagatcaagggagt
ataccagatgttgaacattctcaaattattcctgcaattctaaagccttctgcgtgcgat
gcttctaactggctgtcaggtgatgtggctttgcatcttgagtcgcatggtaaattggat
ttagctcttcaatatttctcaaaattgatgtgggagcatcctagttggcctaatctagga
tctgatagagccagtacatgctctatggatcttgaaactcatcaacacgagaaaatacta
gaaaattttcaatgcaagttatacactggacttgcatatcttaagcagagatttgcattg
gaatcttcctgtctaatcagcatgattttagtcttgttgtgcaacaacgggttattattt
attggatatgacatattacgtggatatacttgtcaaggactctcacaagatgagagcaat
gtaaaagatagcttcctcttatattatcttcagcataagccacttgtgaaagctactgaa
gatttctccttttttatttcacggtttattgctgcctcaagcattacttgcttcaatttg
aaaccacttcatattgaaaatggcctgtgtagagaagttggatcagcatgtttaaatgct
tggaagcattactttgaatgtgttatattgtcattgtggagtttaagagctgctatgagg
aatttttctggctacttaactgaagaactcattatggaaccccttgttcttcttgattta
tacgagtattatgtgcattttgcctctgcttggcgtcagagaaattcaaaaagtattctt
ctgctcgtgcaacctctcttgattacctataccaatgggcatactccctacgaagttaat
atggtgaatctgaagaaaattttccaccaaactgcagagttggtagcctgtacatcaatt
gataatgtggaagggatgcttcaggttcctaaaattattgatgataaaaaatgcgatctt
atgcattcaattccagaagatgaaagatggcatatcatggcggcttgcttgtggcaacac
atgtccagattcactaaacataagcttaattctatatccgtgaaacttgatgacaatcat
tctactggtgtaatggaacacatcaggctgctctccttgatattgagcaaatcattgaag
tccacattgttacatgtttcttcttatcatgtaaaacagcttgcaatattcctgcagcag
aaagtagagattggacatgacgttccaacttgtcgatggttagatgagtctaaactgtct
caacctggagtcctctatccacatctacgtgagggtgctgcaagtatgtacatgatgaat
aacaaggatgaagctgtatctgaattactctgggatgcttgtgctgatgcaaatatgata
tttgaaggttttgtgcaagaaaaaataaattggcaacatcatatccatagtaaacgttct
aaaggatggactcacataaatgaaggtgtcatgatggatcacgaaaatgaggcagctcac
aaccatggaggcaattctagcagtacttctgctggtggtgaagttggactgcctggtaag
ggcctttttcgaaatggccatgctttactgagctcctggcagaaagatacaagcattgta
aatgaggttacacctttccaatcccctcaagaaatatacaggagaaatggggagcttttt
gagacaatgtgcatcaactctgttgatcaaaggcaggtagtagttgctagcaatcgaaag
ggaatagttttctttgattgggaagatgggctgcctttcagaggtcaagctgaatatatt
tggtcagatgctgattggccacataatggttgggctggttcagaatcaacccccatggca
acatttgtttctcctggcattggtcttgggagcaagaaaggggcacgccttgggttaggt
ggtgctacctttggcttggatttgtcagcaagaccagcgagagatttgactggtggtgga
gcatttgggattccaggttatgctggtattggagcatctggcttaggttgggagattcaa
gatgattttgaggagtgtgttgatccaccagctacattggaaaatataagtacaagggct
ttctcaagtcacccctccaggccttttttcttggttggttctagcaatacacacatttac
ttatgggagtttggtaaggataaagcaactgctacttatggcgtgcttcctgctgcaaat
gttcctcccccatatgctcttgcatcaatttccgctttgcaatttgatcactttgggcac
agatttgctagtgctgcactggatggaactgtatgcacatggcagctcgaggtgggagga
aggagcaatgtccgtccgacagaatcatcactctgctttaatagccatgcagtggatgtc
acttacattacttcaagtgggtctgttattgctgcagctggacatagctctagtggtatt
aatgtggttatatgggacacattggctccacctacaagctccagggcttccatcatttgt
catgaaggtggtgcgcgctccatttctgtgtttgataacaacattggaagtggatctgtt
tctccccttattgtgactggtggtaaaggtggtgatgttggaattcatgacttccggtac
atagcaactggaagagctaaaaggcacaggcacttggatactggtgaactaagtataaac
tcttctgcaaatactgatacgcgaacaggctttgggaataatcctggagaccagaatggg
atgctttggtatataccaaaggctcacttagggagtgtcacaagaatatctaccatccca
aataccagtttgttcttaacaggaagcaaagatggagatgttaaactttgggatgccaaa
gcggccaagttagtttatcattggtcaaaattgcatgaaaggcacacctttttgcagcca
agctctcggggttttggtggagttgttcgggctgctgtcacagacatagaagttgtttct
catgggtttcttacatgtggtggagatggttctgtgaagctggtacaactcaaagatttt
accaacttcggatgtgaatatgttgagcaacttctattttaa
DBGET
integrated database retrieval system
