Pistacia vera (pistachio): 116112391
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Entry
116112391 CDS
T07386
Name
(RefSeq) E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116112391
Enzymes [BR:
pvy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116112391
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116112391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
Rtf2
zf-rbx1
zf-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Zn_ribbon_6
Prok-RING_4
Sina_RING
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
116112391
NCBI-ProteinID:
XP_031254392
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MSTQELGKFPERDVKNAQRRRILPDLDLNNPPPDESTTPADISFNFNSQQCPPEACQGYQ
EESRSIEIIDDDVAIIDQSMFDEAKNNYRRNQSQVIDGLKDVPNEAGGLLNSLSGSKTAN
WYCKQRRDPMDEVITSRYLSMMEEASNRDKEKNVVKPVEFSKNPEPEAPSFICPICIGPM
SMATTTKCGHVFCQECIKKAIAAQGKCPTCRKKLGKRGIIRVFLPTTN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacaggaattagggaaatttccagaaagggatgtcaaaaatgctcagaggagg
agaattctaccagacctggacctcaacaatccaccgcctgatgagagcacgaccccggct
gacatatccttcaatttcaattctcaacagtgtccacctgaagcgtgccaaggttatcaa
gaggaaagcagaagtattgagatcattgatgatgatgttgctataattgaccaaagtatg
tttgatgaggccaagaacaattatcggagaaaccagtctcaggttatcgatgggctaaaa
gatgtgcctaatgaggctggcggattgttaaatagtctttcaggtagcaaaacggcgaac
tggtactgcaagcaaagaagagatccgatggatgaagtaattactagtagatatcttagc
atgatggaagaagctagtaacagagacaaggagaagaatgttgtgaaaccagtagagttt
tcgaagaatcctgagcccgaggcgcccagtttcatttgtccgatctgcatcggtccaatg
agtatggcaacaacaacaaagtgtggccatgtgttctgccaggaatgcataaagaaagcc
attgcagctcaagggaaatgtcctacttgcaggaagaaacttggaaagagaggcatcatc
agggtgtttcttccaacaaccaattga
DBGET
integrated database retrieval system
