KEGG   Pistacia vera (pistachio): 116112986
Entry
116112986         CDS       T07386                                 
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
  KO
K17302  coatomer subunit beta'
Organism
pvy  Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvy04131]
    116112986
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvy04147]
    116112986
Membrane trafficking [BR:pvy04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    116112986
Exosome [BR:pvy04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   116112986
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd WD40_like Beta-prop_Nup120_160 Beta-prop_SPT8 WD_LRWD1 Clathrin Beta-prop_DCAF12 TPR_GEMI5 TPR_CcmH_CycH
Other DBs
NCBI-GeneID: 116112986
NCBI-ProteinID: XP_031254972
LinkDB
Position
Unknown
AA seq 915 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAVGYMKGSRRVVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ
EKKSIRPTFSAEHIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
ASDSSFYILKYNRDVVLSHLDSGRSVDEQGVEDAFELLHETNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLDRANEILPSIPKEHHNSVARFLESRGMIEEALEVATDPDYRFELAIQLGRLEVAQD
IAKEVQSESKWKQLGELAMSTGKLEMAEECMKYAMDLSGLLLLYSSIGDAEGISKLASLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLHK
VNPKAAESLADPEEYPNLFEDWQVALSVESKVAETRGVYPPAEDYVNHVDKSHITLVEAF
RNMQIEEEETLENGDFDHEETEQNGEKNAEEQNGEEESQEEAVVVDADSTDGAVLVNGNE
AEEEWGTNNEGTPSA
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgccgctcagacttgaaatcaagagaaaacttgctcaaagatcagagagagttaagtct
gtggatttacatccaactgaaccatggattctagcgagtttgtattctggaactgtgtgt
atttggaactaccagtctcagactatggctaagtcatttgaggtcactgagttgccagtt
aggtcagcaaagtttgtagcacgcaagcaatgggttgttgctggagctgatgacatgttt
attcgtgtatacaattacaatacaatggacaaagttaaagtatttgaagcacatacggat
tacattaggtgcgttgctgtccatccaacccttccgtatgtgctgtcatcatctgatgat
atgctcataaaactatgggactgggagaagggttggatgtgtactcagatatttgaggga
cattctcactatgttatgcaagtaacatttaatccgaaagacaccaatacttttgccagt
gcatctcttgatcgcaccataaagatttggaaccttggttccccagacccaaattttacc
ttggatgcccatcagaaaggagtaaattgtgttgattattttactggtggtgataaacct
tatctgatcactggttcagatgatcataccgccaaggtgtgggattatcaaaccaaaagt
tgtgtccagacgcttgaaggccacactcacaatgtctctgcagtatgttttcatcctgag
cttcctattatcatcacaggttctgaggatgggacagtacgcatttggcatgcaactact
tataggcttgagaacacattgaattatggtcttgaaagagtttgggccgttggatatatg
aaaggttcacgcagagttgtgattggttatgatgaaggaactattatggtgaaaattggc
cgcgaagaacctgtagctagtatggataatagtggaaagatcatatgggccaagcataat
gaaattcaaactgtgaacatcaagagtgtgggggctgattttgaggtaactgatggagaa
agattgcctttggctgttaaggagttgggaacctgtgatctttacccacaaagcttaaag
cacaatccgaatgggaggtttgttgttgtctgtggagatggcgagtacattatatatact
gctttggcatggagaaataggtcctttggctcagcactggagttcgtttggtcatctgat
ggagaatatgctgttagagaaagctcgtcaaagattaagattttcagtaaaaattttcag
gagaaaaagagtatcagaccaaccttctcagctgaacatatttatggaggtacattgttg
gcaatgtgctcaaatgattttatctgcttttatgattgggctgagtgcaggttgattcgg
cggattgatgttactgtgaaaaatctttattgggctgatagcggtgatttagtggcaatt
gctagtgattcgtcattctacatcctgaagtacaatcgggatgtagttttatctcattta
gacagtggaagatcagttgacgaacaaggtgttgaggatgcctttgagcttctccatgaa
accaatgaacgtgtcaggactggtatatgggttggggattgtttcatttataacaattct
tcgtggagacttaattactgtgttggtggtgaggtaaccacaatgtttcatttggaccgc
cctatgtacttgttgggataccttgctagtcaaagccgtgtgtatctaatagacaaggag
ttcaatgttatgggatacacactgcttctgagcttgattgagtacaagactcttgtgatg
cgtggagatttggatagagctaatgaaatattaccttcaattccaaaagagcatcataac
agtgtggctcgtttcttggagtcacgtggaatgatagaggaagctttggaagtggctact
gatcctgattatagatttgagctagctattcagcttggtagattggaggttgcacaggat
attgctaaagaggtgcagagtgagtctaaatggaagcaattgggagaattagctatgtct
actggaaagttagaaatggctgaggaatgtatgaaatatgcaatggatttgagtggttta
ttgctgctctactcttccataggagatgctgaagggatatcaaaacttgcttcccttgca
aaagagcaagggaagaacaatgttgctttcctttgtttattcatgttgggtaaattggaa
gactgcctccagctgttggtggaaagcaatcggatacctgaggctgctttgatggcacga
tcataccttccaagcaaggtttcagagattgtcgctatttggaggaaagacctgcataag
gttaatccaaaagctgctgaatctttggccgatcctgaagagtatcctaacttgtttgag
gattggcaagttgctctttctgtggaatctaaagttgccgagacaaggggtgtgtatcct
cctgccgaggactatgtaaaccatgttgataaatcacacataacccttgtggaggctttc
agaaacatgcaaattgaagaagaggaaactcttgaaaatggagacttcgatcatgaggag
actgaacaaaatggagaaaagaatgctgaggagcagaatggagaagaagaaagccaagag
gaggctgtcgtggtggatgctgattctacagatggtgctgtactcgttaatggtaacgag
gctgaagaagagtggggtacgaataatgagggaaccccgtcagcctaa

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