Pistacia vera (pistachio): 116113174
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Entry
116113174 CDS
T07386
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116113174
04121 Ubiquitin system [BR:
pvy04121
]
116113174
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116113174
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
116113174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
RNA_bind
NCBP3
Motif
Other DBs
NCBI-GeneID:
116113174
NCBI-ProteinID:
XP_031255197
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MSSHSQVRNDRNDRRDRPRFTAQGARQEWIPRGATPTSSVITPPQASNVIGNGIGGPTSY
SSMPRDNHGRGRIDFRGQKGQPVNNRRDRNGSKDKKEQDPNMPQLVQEIQEKLAKGSVEC
MICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTSVDLSAEKSQGFNWRCPGCQSVQL
LSSKEIRYVCFCGKRPDPPSDLYLTPHSCGEPCGKQLESEIPNSGLSKEDLCPHVCVLQC
HPGPCPPCKAFAPPRLCPCGKKLITTRCSDRKSVLTCGQQCNKLLSCLRHRCEQICHLGP
CDPCQVLVNASCFCKKKLEVVLCGDMAVKGEIKAEDGVFSCCSTCGKELSCGHHKCGEIC
HPGPCGDCELMPSKIKSCHCGKTSLQEQRKSCLDPIPTCTQKCGKALACGVHHCNEVCHS
GDCPPCLVHVTQKCRCGSTSRTVECYKTTGDEKFTCEKSCGRKKNCGRHRCSERCCPLSN
SNNLVSGDWDPHFCQMSCGKKLRCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPP
PLPCGTPTPSCQLPCVVPQPCGHSASHSCHFGDCPPCSVPIAKECIGGHVVLRNIPCGSK
DIRCNKLCGKTRQCGMHACGRTCHPAPCDTAGVSVSGLKTSCGQICGAPRRDCRHTCKAL
CHPSAICPDVRCEFTVTISCSCGRITASVPCDAGGSNSGFNADTVLEASLLQKLPVPLQP
VESTGKKIPLGQRKLMCDDECAKLERKRVLADAFDINPPNLDALHFGENSAVSELLADLY
RRDPKWLLSVEERCKVLVLGKNRVSTNGLKVHVFCPMLKDKRDAVRLIAERWKLVVQAAG
WEPKRFIVVHVTPKSKPPPRIMGIKGASTVNATHPPAFDPLVDMDPRLVVSFPDLPREAD
ISALVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDHGSVYYGAVVVMQNGASAAS
TATNAWGGAGTVKEGVTLASLKGNPWKKAVVQEPGLRENSWGEEEWSGDFGDLQASAWKK
KDAPIAASINRWTVLDSETSTSSSAAPLRAEDPLKRAATQSSSGFESNSSSSNPAGQPGT
TTLNETDQSEVVDDWEKAYD
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcattctcaagttcgaaatgatagaaatgatagaagggataggcctagattt
actgctcaaggtgcccgccaagaatggatcccaagaggagcaacacccacgtcttcagta
ataaccccacctcaggcctcgaatgtaattggaaatgggattggtgggccaacaagttat
agctccatgccgcgagataaccacggcagaggaagaattgacttcagagggcaaaagggg
caacctgtgaataatcgtcgggataggaatgggagtaaggataagaaggagcaggacccg
aatatgccacaacttgtacaagaaattcaggagaagctcgcgaagggttcggttgagtgc
atgatttgttatgatatggttaggaggtctgcaccaatatggtcttgctcgagttgttac
tcaattttccatttgaattgcattaagaaatgggctcgggcgcctacttctgttgatttg
tcagctgagaagagtcaggggtttaactggcggtgtccgggatgtcaatctgtgcagctg
ctgtcatcaaaggagattcggtatgtttgtttttgtgggaagaggcctgacccaccttct
gatttgtatttgactccacattcgtgtggggaaccatgtgggaagcagcttgagagcgag
attccaaattctggtttgagtaaggaggatctttgccctcatgtttgtgtcttgcagtgc
catccaggtccatgccctccttgtaaggcatttgctccaccccgtttgtgcccttgtggg
aaaaaactaattacaactcgatgctctgatcgaaagtctgttctaacctgtggtcagcag
tgcaataagcttcttagttgcttgcggcaccggtgtgagcagatatgccatttgggtcct
tgtgatccttgccaggttcttgtcaatgcatcatgtttttgcaagaaaaagctggaggtt
gttctttgtggagacatggctgtgaagggggaaattaaagcagaagatggtgtcttttct
tgttgttcaacttgtggaaaggagcttagttgtggacaccataaatgtggtgaaatttgt
caccctggcccttgtggggattgcgaattgatgccaagtaagatcaagtcttgtcattgt
ggaaaaacaagcttgcaggagcaaaggaagagttgtttggacccaattccaacttgcaca
caaaaatgtggcaaagctcttgcttgtggagtgcaccattgtaatgaggtgtgccattct
ggggattgtccaccttgtttggttcatgtcactcaaaagtgtcgttgtggttcaacatct
cgaactgtggaatgctataaaacaacaggggatgagaagttcacatgtgaaaagtcttgt
gggcggaagaagaattgtggcaggcaccggtgtagtgaacggtgttgccctctttccaac
tctaacaaccttgtttctggagattgggatccacacttttgccaaatgtcctgtgggaag
aagctgaggtgtggacagcattcttgtgaatcgttgtgtcacagtggtcattgccctccc
tgccttgaaacaatcttcactgatctgacttgtgcttgtgggaggacttcaatccctcct
cctttgccttgcggtacacctactccttcatgtcagctcccttgtgtagttcctcagcct
tgtggccattcagcatctcatagttgtcattttggagattgcccaccttgttcagtgcct
atagctaaggagtgcattggtgggcatgtggttctcaggaacataccttgtgggtcaaag
gatattagatgtaacaagctctgtggcaagaccaggcagtgtggtatgcatgcatgtggc
cgaacttgtcacccagcgccttgtgatactgctggagtatctgtatcaggcttgaaaact
tcttgcgggcagatctgtggtgctccaaggagagattgcaggcatacatgtaaagcatta
tgccacccttctgccatttgtcctgatgtaagatgtgaatttactgttaccatcagttgt
tcttgtggcagaatcacagccagtgttccttgcgatgctggaggcagcaatagtggtttt
aatgctgatactgttttagaagcttcccttctccaaaagttacctgtgccacttcaacca
gtggaatcaactggcaagaagattcctctgggtcagagaaagcttatgtgtgatgatgaa
tgtgctaaattggaacgtaaacgggttcttgcagatgcctttgatatcaaccctccaaat
ttggacgcacttcattttggtgagaactctgctgtgtctgagttgcttgcagacctgtat
aggcgagatccgaaatggttgctttctgtggaggagagatgcaaggtcttggtgctcgga
aagaacagagtatctacaaatggtcttaaggttcatgttttctgtccaatgctgaaggat
aagagagatgcagtaaggctaatagctgagaggtggaagcttgttgtccaagctgctggt
tgggagccgaagcgtttcattgtggttcatgtcacacccaaatctaagcccccaccgcgg
attatggggatcaagggtgcatccactgtaaatgcaactcatccaccagcttttgatcct
ctagtggacatggatcccaggcttgttgtttcttttccagatttgcccagggaagcagat
ataagtgcattggtattaagatttggaggggaatgtgaactggtttggttgaacgacaag
aatgcattggctgtatttcatgatccggcccgggcagcaactgccatgaggaggttggat
cacggatcagtttattatggggctgttgtggttatgcaaaatggtgcatcagcagcatca
acagcaaccaacgcctggggaggtgcagggacagtcaaggaaggagtgacccttgcatct
ctgaagggcaacccatggaagaaggctgtagttcaagagccgggtttgagagaaaattca
tggggtgaagaagaatggtctggtgatttcggagatctgcaggcatccgcatggaaaaag
aaagatgctcctattgctgcttcaataaaccgctggactgtcctagactcagaaacatct
acgagttcatctgctgcacctctgagagctgaagatcctttaaaaagggcagcaactcaa
tccagttcaggatttgagtcaaattcaagtagctcaaatccagcagggcagcctgggaca
acaactttgaatgaaacagatcagtcagaggtggttgatgactgggagaaggcgtatgat
tga
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