Pistacia vera (pistachio): 116113514
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Entry
116113514 CDS
T07386
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116113514
03021 Transcription machinery [BR:
pvy03021
]
116113514
Transcription factors [BR:
pvy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
116113514
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
116113514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
116113514
NCBI-ProteinID:
XP_031255526
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MASVATAPMATDNVPKKARNNSRKALKQKNPSTNEANIIAQTLSQSTMPVPSPETDPSKE
NHESLSQPRSEPKKAAAKGRAKKTTKNQDSFEKDLQDLQEMLEKMKIEKEKTEELLKEKD
EMLKMKDEELDVKEKEQEKLQMELKKLQKMKEFKPNMVFPIINKEQDKKDKKKGCPEKKR
PSPPYILWCKDQWKEVKKENPEAEFKEISNILGAKWKNVSAEEKKPYEEIYQAEKEAYLQ
VMAKGKRESEAMKLLEEDQKQKTAMELLDQYLQFKQEAEKENKKTKKEKDPLKPKHPMTA
FFLFTNERRAALLAENKNVLEVAKITGEEWKNMTEKERGPYEELAKKNKEKYAQEMEAYK
QVKDEEANNLKKEEEELMKLHKQEALQMLKKKEKTENIIKKTKEKRQKKKQNTDPNKPKK
PASSFLLFSKEARQALLQERPGTNNSTVNALIAVKWKELNEEEKQVWNAKAAVAMEAYKK
ELEEYNKSVVAAMDDKAQQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgttgctactgctcctatggccaccgacaacgtccctaagaaagcaagaaac
aacagtagaaaagctttgaaacagaaaaatccttccactaatgaagccaacatcatcgca
caaaccctctctcaatctacgatgccggtcccatccccagagactgacccttcaaaggag
aaccatgagagcctttctcagcctcgctctgagcccaaaaaagcagctgccaagggaaga
gcaaagaagacaacaaaaaatcaagattcttttgagaaagatttgcaagatttgcaagaa
atgcttgagaagatgaaaatagaaaaggagaagaccgaggaactgttgaaggagaaggat
gagatgctgaagatgaaggacgaggagcttgatgtgaaggaaaaagagcaggagaagctt
cagatggagttgaagaaattgcagaaaatgaaggagttcaagcccaacatggtttttcct
attataaacaaggaacaagacaagaaggacaagaagaagggatgtcctgaaaagaaaagg
ccatctcctccttacattctgtggtgcaaagatcaatggaaagaggtgaagaaagagaac
ccagaggcggaatttaaagagatctcaaacattttgggagccaaatggaagaatgttagt
gcagaagagaagaagccttatgaggagatatatcaggccgagaaggaagcctatctgcag
gtaatggccaaggggaagcgtgaaagtgaagcaatgaagctcttagaggaggaccagaaa
cagaaaacagctatggagctgcttgatcagtatcttcagttcaaacaggaagcagaaaag
gagaacaagaagacaaagaaagagaaggatccattaaaaccaaagcatcctatgactgca
tttttcctcttcacaaatgagaggagggcagctcttctagctgagaacaagaatgttttg
gaggtggctaagataaccggcgaagaatggaagaacatgactgaaaaagaaagagggcct
tatgaggagttggcaaagaagaacaaggagaaatatgctcaagaaatggaggcctacaaa
caagtgaaggatgaggaagctaacaatctcaaaaaggaagaggaggagctgatgaaactt
cataaacaggaagccttacaaatgcttaagaagaaagagaaaactgaaaacataataaag
aaaaccaaagagaagcgccaaaagaagaagcagaacactgatcctaacaagcctaagaag
cctgcttcctcattccttttgttcagcaaagaagcaaggcaagctttgttgcaagagcgg
ccagggactaacaactctaccgttaacgcactgattgcagtgaaatggaaggaactcaat
gaagaagagaagcaagtgtggaatgctaaggcagctgtggcaatggaagcatacaagaag
gaattggaagagtacaacaagtctgttgttgcagccatggatgacaaagcacagcaatga
DBGET
integrated database retrieval system
