Pistacia vera (pistachio): 116113538
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Entry
116113538 CDS
T07386
Name
(RefSeq) protein CHROMATIN REMODELING 19-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvy03036
]
116113538
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116113538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_22
56B_RHH
Motif
Other DBs
NCBI-GeneID:
116113538
NCBI-ProteinID:
XP_031255549
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MKREFAEISDDEWENHSFKPSRVLKIKTQASKPPPSIESFAFKADSHRQNLDENLEDDDV
EEEGPPSAANNRGRRFIVDDDDEEQRSEGDFAEVYEVKSSTEEEEVLEDDGQEDDVVGNA
LAKCAKISAELKRELYGTSGTACDRYSEVEASSVRIVTQNDIDEACGDEDEDFQPVLKPY
QLVGVNFLLLLYRKGIGGAILADEMGLGKTIQAVTYLMLLKHLNNDPGPHLIVCPASVLE
NWERELKKWCPSFSILQYHGAARTAYSKELSSLAKAGLPPPFNVLLVCYSLFERHSVQQK
DDRKFLKRWHWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWS
LLEFMMPDLFATEDVDLKKLLNAEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQQVE
YVIMEKQQDDAYREAIEEYRAASRARIAKLYEPNLNNIVGVLPRRQISNYFVQFRKIANH
PLLVRRIYSDDDVVRFARKLHPMGAFGFECTLDRVIEELKSYNDFSIHQLLHSYGGADTK
GILSEKHVMLSAKCRALAELLPSLKKGGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDG
STQVSERQAIVDTFNSDASIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDR
CHRIGQTKPVTIYRLVTKGTVDENVYEIAKRKLILDAAVLESGMEVANEGDTSDRTMGEI
LSSILMG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagaattcgccgaaatttcggacgacgaatgggaaaaccattccttcaagccg
tctcgagtcctcaaaataaaaactcaggcatcaaaacctcctccttcaatcgaatcattc
gcttttaaagccgatagtcaccgccaaaatttagacgaaaatctcgaggatgacgatgta
gaggaggaggggccaccgtccgccgcgaacaatcgtggccgtcgattcattgtagacgac
gatgatgaggaacagcggagcgagggagattttgctgaagtatatgaagtaaagtcttcg
actgaagaagaagaagtattagaagatgatggacaggaggatgatgtggttggaaacgct
ttggcaaaatgcgctaaaatatcggcggagcttaaaagagagttatatggtacttctggt
accgcttgtgatcgctactcggaagttgaagcttcctcggttaggattgtgactcagaat
gatattgatgaagcatgtggggatgaggatgaggatttccagccagttcttaagccctat
cagctggttggtgtcaattttcttctcttgttgtatcgaaagggcattgggggagccata
ttggcagatgagatgggtcttgggaagaccattcaggctgtgacatatttgatgcttcta
aagcacttgaataatgaccctggaccccacttaattgtatgtcctgcctctgttttggaa
aattgggagagagaactaaagaaatggtgtccatcattttctatactccagtatcatggg
gctgcacgaacagcctattcaaaagagttgagctctttggccaaagctggattgcctcct
ccgtttaatgtgcttcttgtgtgctattctctttttgaacgtcacagtgtgcagcagaaa
gatgaccgtaaatttctgaaacgttggcattggagctgtgtgttgatggatgaggctcat
gctttgaaggataaaaacagctataggtggaagaatctaatgtctgttgctcgaaatgca
aaccagcgactaatgctgacagggacgccactacaaaatgatttacatgagctctggtca
ttgttggagttcatgatgcccgatctttttgctactgaggatgtagatttgaagaaacta
ctaaacgcagaagatagagacttaataggtcgaatgaagtccattttaggaccattcatc
ttgaggcgtttaaaatctgatgtaatgcaacaacttgtcccaaagatacagcaggttgag
tatgttataatggaaaaacagcaggatgatgcttatagagaagccatagaggagtatcgg
gctgcgtcacgagctcgtattgctaagctttatgagcctaatttgaataatattgttgga
gttcttcctcgacgtcagatttccaactattttgttcagttccgtaagattgcaaatcat
cctttattagtgaggcgaatctactctgatgacgatgttgttcgatttgctagaaagtta
catcctatgggtgcatttggatttgaatgtaccttggaccgagtgatagaggagcttaag
agctacaatgatttttctattcatcagcttttacactcttatggcggtgctgataccaag
ggaattctttcagaaaaacatgttatgctttctgcaaaatgtcgggcattagctgaactt
cttccctctctgaagaaaggtggccaccgggttttgatttttagccagtggacatcaatg
cttgatatcttagagtggactttggatgtgattggagttacatatagacgacttgatgga
agtactcaggtgtcagagaggcaggctatagttgatactttcaatagtgatgcttccatc
tttgcttgcttgctttccacaagagctggtggccaaggtttaaacttgactggtgctgat
actgttgtcatccatgacatggatttcaatccacagattgatcgacaggcagaagatcgt
tgtcatcgtattggccaaacaaagcctgtcaccatatacaggctggtaaccaaggggacg
gttgatgagaatgtttacgagatagcaaaacggaagctaattttggatgctgcggttctt
gagtctggtatggaggtagctaatgaaggtgacacatctgataggactatgggagagata
ctatcatctattctaatgggttag
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