KEGG   Pistacia vera (pistachio): 116113725
Entry
116113725         CDS       T07386                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
pvy  Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvy03036]
    116113725
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116113725
Chromosome and associated proteins [BR:pvy03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116113725
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116113725
SSDB
Motif
Pfam: MMS19_N MMS19_C
Other DBs
NCBI-GeneID: 116113725
NCBI-ProteinID: XP_031255743
LinkDB
Position
Unknown
AA seq 1155 aa
MVQPSHLSQHIESFVNLSSSPAHQAASLDAVVSLLKNNVLTIEKLVREMDMYLTTTDDVT
RARGILLLGEVLSNLVSKPLDDATVHSLIAFFSDRLADWKALRGALVGCLALVRRKSSGG
VVTANDAKAVAQSYIQNLQVQSLAQRDRKLCFELLEGLLQRFPDAIASLGEDFLYGICEA
IDGEKDPQCLMLTFCIVEVVAQVFPDDLLASFASDLFEILGCYFPIHFTHSTGEDFDVKR
DDLSSALMRAFSSTPLFEAFAIPLLLEKLSSSLPSAKVDSLKYLSSCTLTYGADRIAKHA
GAIWSSIKDAIYFSLEPSLSFGLESLDGLGFEDNAILREALTLLQTVIKQNTDLFLSQII
ADEDINFIFRSISNFKSYNNIPMQSKQKLHAVGCILSVSVKASLASCNRVMESFFPSLVD
ALGLSVRNSSQDCFPNDDYVLAERLNHAALYLCIELIAACRDEISGSEPFMTQSALAHEK
WCCLIQSFSASLTKAFTFTLATSTNEDAYDADVYFGVKGLLILGTFPGGSLIISKSTFEN
ILLTLTSIITADFEKTLLWKLALKALVYIGLSIDRCHASEKELSYMGIVIEKIVLLASFN
DLSMPLPLKLEAISEIGASGSNYLLKIVQGLEEAICANLSEVYVHGNSKSAEVVVQLLEC
YSNKVFARIHETGSFEEVLLRFALNIWGLLENCAAFSVQTHEKGLLDATMKAMKLAVASC
SVETQSIIVERAYSVLSSSTSFPKEPMAAIPIQLKGLQLTQEIDVGSSRDEWIYSLFASV
VIALHPQTHIPNVRLVLHLFMTSILKGNVPAAQALGSMVNKFGLNANGTDVSSTCTLEEV
MDIIFNTSLCSFNDNGPSRIHGGMNNGSEMCLNSICRGVVNSRSLQIHAITGLAWIGKGL
LMRGHEKVKDITMILIECLLSNDKKGSLPAEQESSEDISEQGVHPSVMKCASNAFQILMS
DSENCLCRKFHATVRPLYKQRFYSTIMPILQSLIVKSESSFSRSMLYRACAYIMSDTPLV
VLLNDAKKVIPILMEGLSVLCSDTLDKDILYSLLLVISGILTEKNGQEAVLECAHIIINH
LIGLITYPHMMLVRETAIQCLVAMSRLPQARIYPMRVQVLQAISMALDDPKRAVRQEAVR
CRQAWAPVASRSLHF
NT seq 3468 nt   +upstreamnt  +downstreamnt
atggtgcaaccgagtcatctgagtcagcacattgagtcattcgttaacttgtccagctcg
cccgctcaccaggctgcaagtttggatgcagttgtttctttgttgaagaataatgtgttg
actatagaaaaactggttagagagatggatatgtatttgactaccactgatgatgtcact
cgtgcaagaggtatccttcttcttggagaagtcctttcaaatcttgtgtcaaagccgctg
gatgatgctactgtacatagcctgatagcattcttctcagatagactggcagattggaaa
gctctccgtggtgcacttgttggttgtttggcactagtgaggaggaaaagtagtggtggt
gtggttactgcaaatgatgcaaaagcagttgcccagtcttatatacaaaacctacaggtg
cagtcattagcacaacgtgataggaagctttgctttgaacttttggaaggcctattacaa
cgttttcctgatgccattgcttcactgggtgaagactttctctacggaatctgtgaagct
attgatggggagaaggatccacagtgcttaatgctaactttttgcattgttgaggttgtg
gcacaagtatttcctgatgatctgcttgcaagttttgccagcgacctttttgaaatttta
ggctgttacttccccattcattttactcattctacaggtgaggactttgatgtgaaaaga
gatgatctttcatctgcattgatgcgagcattttcctccactcctctttttgaggccttt
gccattccattgctccttgaaaaactttcttcctctttgccatcagcaaaggttgattct
ctgaagtatctcagcagttgtacactgacgtatggtgcagaccggatagcaaaacatgct
ggagcaatttggtcatcgataaaggatgcgatatacttttcactggagcctagtctgtcc
tttggtttggaatcactggatggccttggctttgaggacaatgcaattttacgagaagct
ctaactcttctgcagacagttatcaagcaaaatactgatttgtttttaagtcagattata
gctgatgaagatataaattttattttcagatccatctctaattttaagagttacaataac
attcctatgcaaagcaagcagaaactacatgcggttggttgcatcctttctgtctctgtc
aaagcttctcttgcctcctgcaatagagttatggaaagtttcttccccagcttggtggat
gctttagggctttcagtcagaaactcatctcaggattgctttccaaatgatgattatgta
cttgctgaaaggcttaatcatgcagctctttatctctgcattgaacttattgcagcatgc
cgagatgaaatatcaggctctgaaccattcatgacacagtctgctcttgcacatgagaaa
tggtgttgcttgattcagagcttttctgcttcattaactaaggccttcacttttaccttg
gcaacaagcacaaatgaagatgcttatgatgcagatgtatattttggagtgaagggtctt
ctgattctgggaacattccctggtggctctttaataatatcaaaatctacatttgagaat
attttgttgacattaacatcaattatcactgcggacttcgagaagactctgttatggaag
ctggcactaaaggcactggtgtacattggcttgtccattgatagatgtcatgcgtctgag
aaggaactgagctatatgggtattgtcattgaaaagattgttttattggcatctttcaat
gatttaagtatgccattaccactcaaactggaagcaatttccgagattggtgcaagtgga
tcaaattatttgctgaaaattgttcaaggactagaagaagctatatgtgccaatttgtct
gaggtttatgtccatgggaattctaagtcagccgaagtcgtagttcaacttttggaatgc
tactcaaataaggtgtttgcgcggatccatgaaactggaagctttgaggaagtcttgctg
aggtttgcactgaatatttggggcctacttgaaaattgtgcagctttcagtgttcagacc
catgaaaaagggcttcttgatgcaacgatgaaggcgatgaagctagctgttgcaagttgt
tcagtggagacccagagcataatagttgaaagagcttacagtgtactttcatcaagcact
tcttttccgaaggagccaatggctgccattccaatccaactgaaaggattacagctcact
caagagatagacgttggttccagtagagatgaatggatatattcactatttgcatcagta
gttatagcacttcatcctcaaacacacattccaaatgtgaggctggtattacatctgttt
atgacaagcattctcaagggtaatgttccagcagctcaagcattgggttccatggttaac
aaatttggtctgaatgccaatggaacagatgtatcaagtacatgtaccttggaagaagta
atggatataattttcaacacgagtttatgtagtttcaatgataatggtccttcaaggata
catggtgggatgaataatggcagtgagatgtgtcttaatagtatatgccgcggtgttgta
aatagtagatctcttcaaatccatgcaattactgggctagcatggattggaaaaggtttg
cttatgcgggggcacgaaaaagttaaagacataactatgattcttatagagtgcttattg
tcaaatgacaaaaaaggttctttgccagcagagcaggaatcctcagaagacatatctgag
cagggtgtgcatccatctgtcatgaaatgtgcttcgaatgcatttcaaattcttatgagt
gattctgaaaattgtttatgccgaaaattccatgcaacagtacggccactttataagcaa
cgtttttattcaaccataatgccaattctgcaatctttgattgtgaaatctgagtcatca
ttctcaagatcaatgctgtatcgggcctgtgcatacataatgtcagatactcccttagtt
gttctcttgaatgatgccaagaaggtaattccaatattgatggagggattatctgtgtta
tgtagtgatactttggataaagatatactgtacagtctcctgctggtcatatctgggata
ttgacggaaaaaaatggacaagaagcagtcttagagtgtgctcatatcatcattaatcat
cttattggacttattacctaccctcatatgatgcttgttcgagagacagcaattcagtgt
ctggttgccatgtctagactgcctcaagcacggatttatcccatgagagtacaggtacta
caagcaatatccatggcactagacgacccaaagcgagctgttcgtcaggaagctgtaaga
tgccggcaagcatgggcaccagttgcatcaagaagtcttcatttctga

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