Pistacia vera (pistachio): 116114213
Help
Entry
116114213 CDS
T07386
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like isoform X1
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116114213
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116114213
Spliceosome [BR:
pvy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116114213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
nSTAND_NTPase5
PhoH
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
116114213
NCBI-ProteinID:
XP_031256230
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MNTLSILSPLNTFSVFSFATSKPSSSFKFHILPQTVGSCIYKPLFSPNSLQFRASYKSPK
SVFSAEPGLSDADGEEEEEEDYNDDDDEEEVADEYDDISCGISDEFQQSEDEFETSVDST
DASTRREEFKWQRVEKLCNEVKEYGDELIDVDELASVYDFRIDKFQRSAIEAFLRGSSVV
VSAPTSSGKTLIAEAAAVATVARGRRILYTTPLKALSNQKFREFRETFGDNNVGLLTGDS
AVNREAQVLIMTTEILRNMLYQSVGMVSSESGLFEVDVIVLDEVHYLSDISRGTVWEEII
IYCPEEVQIICLSATVANADELAGWIGQIHGKTELVTSSRRPVPLTWHFSTKNALLPLLD
EEGKHMNRKLSLNYLQLLASEGKSYRDDGSRRRNSRKRRGDMSVNNNSASGQPKLSKNDM
NTIRRSQVPQVIDTLWHLRARDMLPAIWFIFNRRGCDAAVQYLEDCNLLDDCEMSEVELA
LKRFRILYPDALRETAVKGLLKGVAAHHAGCLPIWKSFIEELFQRGLVKVVFATETLAAG
INMPARTAVISSLSKRIASGRIQLTSNELLQMAGRAGRRGIDERGHVVLVQTPFEGAEEC
CKLLFAGVEPLVSQFTASYGMVLNLLAGAKIIRRSNESDNMKALQAGRTLEEARKLVEQS
FGNYVGSNVMLAAKEELAKIQKEIEMLTSEISDDAIDRRSRRLLSEAAYKEIADLQEELK
AEKRLRTELRRRMELKRFSALKGLLREFENGHLPFLCLQYKDSEGVEHSVPAVYLGKFNS
LNSPKLKNMVSSDNSFALNVVAVQTNGDDFEIQDVEPSYYVALGSDNSWYLFTEKWIKTV
YKTGFPNVALAQGDALPRETMGLLLDEGDMQWEKLAGSESGGLWCMEGSLETWSWSLNVP
VLNSLSEDDEVLHMSQEYHDAVENYKQQRTKVARLKKKIARTEAFKEYKKILDTVKFTEE
KIKRLKARSNRLINRIKQIEPSGWKEFLRISNVIHEIRALDINTHVIFPLGETAAAIRGE
NELWLAMVLRNKILLDLKPAQLAAVCASLVSEGIKVRAWKNNGYIYEPSTTVINVINFLE
DQRSSLLQLQEKHEVEITCCLDSQFTGMVEAWASGLTWREMMMDCALDDGDLARLLRRSI
DLLAQIPKLPDVDPLLQKNAMAASGVMDRPPISELAG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaacacactctctatcctctcccctctaaacacgttttcagtattctccttcgcaaca
tcgaaaccttcctcatctttcaagtttcacattcttcctcaaaccgtaggctcttgcatt
tataaaccgcttttctcaccgaattcacttcaatttcgagcctcatacaagtccccaaag
tcagtcttctccgccgagcccgggctttcagatgccgatggcgaagaagaagaggaggaa
gattataacgacgacgacgatgaagaagaagtcgctgatgaatacgacgacatttcttgt
ggaatctcggatgaattccaacaaagtgaagatgaattcgaaacttctgtagactctaca
gacgcgtcgactcggcgagaggagttcaagtggcagagagtcgaaaagctttgtaatgaa
gttaaagagtacggtgacgaattgattgacgttgacgaacttgcttctgtttacgatttt
cgcatcgacaaatttcagcggtcggcgattgaagcgttcttgagaggctcttcagtggtg
gtttctgcgcctacaagcagtggaaaaactttgattgcggaagctgctgcagttgccacc
gtagcgagaggacgccgaatcttatatacgacaccgcttaaggcattgtctaatcagaag
tttcgtgagtttcgggagacatttggtgataataatgttggtcttcttactggagattct
gcagtcaacagagaagctcaggttttaattatgactactgagatcttgaggaacatgttg
tatcagagtgttgggatggtttcttctgagagtggacttttcgaagttgatgtgatagtt
ttggatgaagttcattatttaagcgatatatctcggggtacagtgtgggaggagataatt
atttattgccccgaagaagttcaaatcatatgcctgtcagcaacagttgcaaatgcagat
gagctagctggctggattggtcagatacatggtaaaactgagttagtgacatcgtctagg
cgaccagttccattgacttggcacttctcaaccaagaatgctttactaccccttcttgat
gaggaaggaaaacacatgaataggaagctgtcactcaattatttacaacttttggcttca
gaaggtaaatcgtacagggatgatgggtctagaagaaggaattccaggaaacgcagaggt
gacatgagcgtcaataataatagtgcctctggacaacctaaactttcaaagaatgacatg
aacacaattcgtcgctcacaggttcctcaagttattgatacattatggcaccttcgggcg
cgggatatgctgccagcaatttggtttatttttaacagaagaggatgtgatgcagctgtc
cagtaccttgaagattgtaatctattagatgattgtgagatgagtgaagttgaattggcc
ttgaagaggtttcgcattttgtatcccgatgctctcagggagactgctgtgaaaggactt
ctaaaaggggttgcagcacatcatgctggctgtcttcctatatggaaatcatttattgaa
gagctttttcagcgagggcttgttaaagttgtctttgctacagaaacacttgctgctgga
atcaacatgcctgctaggacggctgttatttcatctctcagcaaaaggattgctagtgga
aggatccagttaacctcaaatgaactacttcagatggcaggacgtgctggacgtagaggc
atcgatgaaaggggtcatgtagtgctggttcagaccccttttgaaggtgctgaagagtgc
tgtaagctattgtttgctggagtggaacctcttgtgtcacagttcactgcttcttatgga
atggtgctcaatcttcttgcaggtgcaaaaattattcgtagatcaaatgaatcagataac
atgaaagctttacaagcaggcaggactttggaagaagctaggaaattagttgagcaaagt
ttcggaaactatgttggcagcaacgtaatgcttgctgcaaaagaggagcttgctaaaata
cagaaagagatagaaatgctgacttcagaaattagtgatgatgctatagacaggagaagt
aggagacttttgtcagaggctgcatataaggagattgcggatctacaggaagagttaaag
gcagaaaaacgccttcgaactgaactacgtagaaggatggagttgaagagattctctgct
cttaaaggtcttttaagggaatttgaaaatggccacttaccctttttgtgcttacaatac
aaagattctgaaggagttgaacactcggtccctgctgtatatttggggaagttcaactca
cttaatagtccaaaacttaagaacatggtttcttctgataattcttttgccctaaatgta
gttgcagttcagacaaatggtgatgactttgaaattcaagatgttgaaccatcttattat
gtggctcttggttcagataactcttggtatttgtttactgagaagtggattaaaactgta
tacaagacaggctttcctaatgttgctttagctcagggagatgctttgccacgggagaca
atggggttgcttctggatgagggggatatgcagtgggaaaagcttgctggttctgaatct
ggtggtttatggtgcatggaaggatctttagagacatggtcttggagtttaaatgtgcca
gttttgaatagtctttctgaagatgatgaagtgttacacatgtcacaggagtaccatgat
gctgttgaaaattacaagcaacaaagaaccaaagtagcacgtttaaagaaaaagatagca
cgcacagaagcatttaaagagtacaagaagatcttagacactgttaagtttactgaggaa
aagataaaacgcctgaaggctagatcaaaccgtttgatcaataggataaagcaaattgaa
ccatctggttggaaagagtttttgaggatcagcaatgtcatacatgaaattagggcactg
gatatcaatactcatgtaatttttccattgggtgaaactgcagctgcaattcgaggagaa
aatgaactctggcttgcaatggttcttagaaacaagattttgctagatttgaagcctgca
caacttgctgctgtctgtgcaagcttagtctctgaagggatcaaagttcgtgcttggaaa
aataacggctacatatacgaaccttccactactgttatcaatgtgattaactttttggag
gaccagagaagttccctattgcaactgcaagaaaagcatgaggtagagataacttgttgt
ttggatagccaatttactggcatggtagaagcctgggcatctggtctgacatggagggag
atgatgatggattgcgccttggatgatggggatttggctcgcctattgagacgatcaatt
gacttattggctcagattcctaaattgcctgatgtagacccactgctacaaaagaatgca
atggctgcctctggtgtaatggatcgtccaccaataagtgagctagctggataa
DBGET
integrated database retrieval system
