Pistacia vera (pistachio): 116114401
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Entry
116114401 CDS
T07386
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116114401
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvy01009
]
116114401
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116114401
Protein phosphatases and associated proteins [BR:
pvy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116114401
Spliceosome [BR:
pvy03041
]
Common components
Common spliceosomal components
SR proteins
116114401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_DEAH11
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
116114401
NCBI-ProteinID:
XP_031256400
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
MRSPSPLREQSRSRSRSRSRSRSRSWSRPRQRSRSRSRGRSRSRSRGRVDITNPGNTLYV
TGLSTRVTERELEKHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSVEDATRCIKYLNQS
VLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDYGHGSRGDRGSRYRSSRDDYGYRRSPR
RSPYRGGRDYSPVHSPHGGRSRRDRSRSLPHSPYGSPVRRYSRGSR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgccttcccctttgagagaacagtctaggtctagatccagatcaaggtctagg
tctaggtcaagatcctggtctaggccaaggcagagatcacggtcccgaagtcgtggaaga
tcaaggtccagaagccgtggcagggttgatattactaatcctggaaacacactttacgtg
actggcctatctacaagagtcacagaaagggaactcgaaaagcatttctcgaaggaggga
aaggttgcttcatgttttcttgttgtggaaccccgtacgcgcatctctcgaggttttgct
tttgtcacaatggactctgttgaggatgccacccgttgcattaagtatctcaaccagtca
gttctcgaggggcgatatatcactgtagagaggtctcggaggaaacgtcctagaactcca
acacctggacactatcttgggctgaaaagtagtagggactatggtcatggttctcgtggt
gatcgtggtagtaggtatcgttctagccgtgatgattatgggtatcgtaggtctcctagg
cgctcaccatatcgaggaggtcgtgattattctcctgtgcactctcctcacggtggaaga
tccaggagggacagatccaggtcgctgcctcattccccttacggtagcccagtaaggagg
tactcacgtggttctaggtga
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