Pistacia vera (pistachio): 116114407
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Entry
116114407 CDS
T07386
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03082
ATP-dependent chromatin remodeling
pvy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116114407
03083 Polycomb repressive complex
116114407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvy03036
]
116114407
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116114407
Histone modification proteins
HAT complexes
HATB complex
116114407
HDAC complexes
Sin3A-HDAC complex
116114407
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116114407
PRC2.2
116114407
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116114407
Heterochromatin formation proteins
Other heterochromatin formation proteins
116114407
Chromatin remodeling factors
NuRD complex
116114407
NuRF complex
116114407
NuRF complex (fruit fly)
116114407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
WD_LRWD1
MIOS_WD40
eIF2A
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
116114407
NCBI-ProteinID:
XP_031256407
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPDKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARNYDDDRSDFGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHTTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKALEATQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWILATGSTDKTVKL
FDLRKISTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPGDEP
TKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagacgaggaagaaatgagaggagagatagaggaaaggctgataaatgaagaa
tacaagatctggaagaagaacactccctttttgtatgatctagtgatcacccacgctctt
gaatggccttctcttactgttgagtggctgcctgacagagaggagccgcctgacaaagac
tattctgttcagaaaatgatcctaggaacccacacttccgagaatgagcccaattatctt
atgcttgcccaggtccagcttcctcttgatgattccgagaatgatgcccgcaactatgat
gatgaccgctctgattttggtggatttggatgcgctaatggcaaagttcaaattattcag
caaattaaccatgatggagaggttaatcgggcccgttatatgcctcaaaacccatttatt
attgcaaccaagactgttagtgccgaggtctatgtctttgattatagcaaacacccatct
aagcctcctctggatggtgcatgtagtcctgatttaaggctcagaggccacaccactgaa
ggttacggtttatcttggagcaagttcaagcagggtcatttgctcagtggttctgatgat
gcccaaatatgtttgtgggatattaatgcaacgcctaagaataaagcccttgaggctaca
cagatttttaaggttcatgaaggggttgtcgaagatgtagcatggcatctgagacatgaa
tacttatttggttctgttggggatgatcaataccttcttatatgggatctacggacacca
tcagtcagcaagcccgtccaatctgttgttgctcaccagagtgaggtgaactgcctagct
ttcaatccatttaatgagtggattttagcaacagggtctacagataagacggttaagtta
tttgatctgcgcaaaattagtactgcactccacacatttgatagtcacaaagaagaggtt
tttcaagttgggtggaatccaaagaatgagactatcttagcttcttgttgtctgggtaga
aggcttatggtttgggacctcagcaggattgatgaggagcagacaccagaggatgcagaa
gatggtccgccagagttgcttttcattcatggtggtcacacgagtaaaatttcagatttc
tcatggaatccatgtgaagattgggttattgccagtgttgcggaggataacattctgcaa
atttggcagatggcagagaacatttaccatgatgaagatgatttacctggagatgaaccc
acaaaagggtcttaa
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