Pistacia vera (pistachio): 116114485
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Entry
116114485 CDS
T07386
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03440
Homologous recombination
pvy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116114485
03460 Fanconi anemia pathway
116114485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvy03032
]
116114485
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116114485
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116114485
DNA replication proteins [BR:
pvy03032
]
Eukaryotic type
DNA Topoisomerases
116114485
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116114485
FA (Fanconi anemia) pathway
116114485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
RVT_2
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
116114485
NCBI-ProteinID:
XP_031256490
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MGLSDAKPCDTPMVPNVRLNVEDGEMFCDPKRHSRIVGKLNYLTVTRPDITFSVSVQSPR
AWFGRFSEVVTQSGLHRSAYDHSVFYKQSSSGIILLVVYVDDIIITGSDDVGIQSLKNCL
ASKFHTKDLGTLRYFLGVEVFRSKKGIFLSQRKYVLDVLTEMGLSEAKPCDTPMVPNVRL
NAEDGEMFGDPEKYRRIVGKLNYLTITCLDIAFSVSVVSQFMSSPRTYHWDAVLHILKYL
KGAPGREILYSDHGHNKVEGFLDADWAGSSVDRRSVTGFCVFVGRNLISWKSNKQPVVAR
SSAESEYRAMAQVTCELIWTRHLLREIGFGDPGTMDLWCDNQASIHIANNPVFHERIKHI
EVDCHFVREKLEQKLIATNHVRTGEQLADIFTKSLVDKRFIPTTLTLDSGVTRPPPLLSE
ADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVMGYDDMGYELW
KPNLRSMMENDMKEVSVGNKSRAEVLASCLQQMKACFLDARMKKVKLLQAMAIFFERSGG
DEQRASGEVVCRCGICQESNMVLRQSRDGNFMVGCVAYPQCRNAVWLPGSVSEAAVTSNA
CNSCSPGPVYLIQFKFRQHEIPPGFSATHLGCIGGCDETLRQLIEICGTGSRIPARGRGP
SVSSGNVQQSNTRQRACIYCQQTGHASSDCPSQLSGSRNARSRAMNMQSGESFMQCTTCG
TTCVLRTANTANNRGRKFYSCPSQECNFFAWEDDLNSGTRGRNNPHAHISGSASNTSRRG
GCGRGRGSQSVGRAPDMTFVSATGDPISGRRCYVCGDPSHFANVCPNRGT
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgggtctaagtgatgctaaaccttgtgacactcctatggttcctaatgtgagattgaat
gttgaggatggagagatgttttgtgatccaaagaggcacagtcggatagttggaaagtta
aactaccttacagtaacccgtccagatattactttttcagtgagtgtgcaatctccacgg
gcatggtttgggaggtttagcgaagtggtgactcagtctggtttacataggagtgcttat
gatcactctgtcttttataagcaatcgagttctggcatcattcttttggttgtttatgtt
gatgacattataatcactggcagtgatgatgttggcattcagagtttgaaaaactgtttg
gcttccaaatttcacacaaaagacttgggtactttaaggtattttctcggagttgaggtt
tttcggagtaagaaagggatttttctctctcaacgcaagtatgtattagatgtgttgact
gaaatgggtctaagtgaggctaagccttgtgacactcctatggttcctaatgtgagattg
aatgctgaggatggagagatgtttggtgatccagagaagtacagacgaatagttggaaag
ttaaactaccttacaataacctgtctagatattgcgttttcagtgagtgtggtgagtcaa
tttatgtcttctcctaggacatatcattgggatgcggtcctccatatcttgaaatatcta
aaaggagctcctggacgtgagattctttacagtgaccatggtcataataaggtagaaggt
tttttagatgctgattgggcaggatcctctgtggatagacggtctgtgactgggttttgt
gtttttgttggaagaaatcttatttcttggaaaagtaacaagcaaccagttgtagctagg
tcaagcgcagagtctgagtatcgggctatggcacaagttacgtgtgagctcatatggaca
agacatcttcttagagaaattgggtttggtgacccagggactatggacttgtggtgtgac
aaccaagcatccatacatatagcaaacaatccagtctttcacgagaggattaagcatata
gaagtggattgtcactttgtacgagagaaacttgaacaaaagttaattgctactaatcat
gttagaacaggggaacaattagctgacatcttcacgaagtctctagttgataaaaggttc
atcccaacaacattgactcttgattcaggagtcactagaccaccgcctcttttaagtgaa
gctgatttactaagttgtatggacaaggcgggcattggaacagatgcgacaatgcatgat
cacataaagaagctgctagataggttttatgcaacaaaggatgcaaacacgcgcttctca
ccaactaatcttggagaggcgctagttatggggtatgatgacatggggtatgagctctgg
aagccaaatctcagatcaatgatggaaaatgacatgaaagaagttagtgtaggcaataag
agtagagctgaagttttggcaagttgcttgcagcagatgaaagcttgctttttagatgcg
aggatgaaaaaagttaaactcttacaagcaatggcaattttctttgagagatctggtggt
gatgaacagcgagcaagtggagaagttgtttgtcgatgtggtatttgccaagaatcaaat
atggtgcttaggcaaagccgggatggcaatttcatggttggttgtgtggcttatccacag
tgcaggaatgctgtttggctccctggatctgtatcagaagcagctgtaacctctaacgct
tgcaactcttgcagtcctggtcctgtttacctgattcagttcaagtttcgtcagcatgaa
atacctcccggtttcagtgccacccatttgggctgcattggtggttgtgatgaaactctt
agacagttaatagaaatctgtggaactggttcacgcattccagcaagaggccgaggaccg
agtgtatcatctggtaatgttcaacaaagtaacactaggcagcgtgcttgcatttactgc
cagcaaacagggcatgcttcaagtgattgcccttcacaactttcaggctctcgaaatgct
cgctctagagcgatgaacatgcaaagtggagagtcttttatgcaatgtaccacatgtgga
acgacatgtgttttgcgaactgctaatacagcaaacaacagaggaaggaagttctactca
tgtccttcgcaagagtgcaatttctttgcatgggaagatgacctcaacagtggcactagg
ggaagaaataatccacatgcacacatcagcggctcagcatctaatacgagcaggaggggt
ggctgtggccgtggcagaggcagtcaaagtgtaggacgtgctccggatatgacttttgtg
tcagctactggtgatcccatatctggtagaagatgttatgtatgcggtgatccatcacat
tttgctaatgtctgcccaaaccgtggtacctga
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