Pistacia vera (pistachio): 116115014
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Entry
116115014 CDS
T07386
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116115014
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116115014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
RE_AspBHI_N
DUF3942
Motif
Other DBs
NCBI-GeneID:
116115014
NCBI-ProteinID:
XP_031257012
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MAATQSQASDRTPEEQPADPDNMKEQVVPVLAKNENSVSPNSSQGAATIGHTREAAAQSG
SFSGGDRSVYSPTIYAPQAQGFYYRGYDNVTGEWDEYAPYVNAEGLELGSPGVYNDNPSL
VFHTGYGYTPQMPYGPYSPVTTPSVGGDANMYSPQQFPFSGPPYYQQLVPPSMPYITSPT
PVSQPELTTLLGADQQNDNMLFGPRPGYPPPVGSFGRGSIPGNSGALGFHDLQQGFDGLR
SGGLWSDWSKTSDRQRPLTPISPALSPQPIGTFGSYGQNVPMASQQQRSFYGFGSGLNSY
NRGYMHSGFNQSSSFGSASISTLGMNNQGWVSLDNSKRRGRGNGSLCGCNGNLDILSEQN
RGPRASKPRSQLTDEQGSSVDDSKLSKAAVKILNESYNRPDFVTDYTDAKFFIIKSYSED
NVHKSIKYGVWASTPNGNKKLDSAYREAKEKQETCPVFLLFSVNASAQFCGVAEMVGPVD
FEKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLDQGI
EMLNIFKNYETDMSILDDFDFYEDRQKAMQERKSRQQASLMTVGVVGENDHRNAVTYPGD
FIKQMSKSFAQVVCLDEGNKEGTGSDRPTSASEGSMGARVTLEDALPAAVSSAQTG
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacccaatcacaagcttcggatcgtacccctgaagagcaacctgcagatcca
gataacatgaaggagcaggtagttcctgtcttagcaaaaaatgagaactcagtttctcct
aattcctcccagggtgctgccactataggacacacaagggaggctgctgctcaatcaggt
tccttttcaggtggagaccgttctgtttattcgcctactatctatgcaccacaggcacag
ggcttctactatagaggttatgataatgtcactggtgaatgggatgaatatgccccatat
gtcaatgctgaaggattggaacttggatctcctggggtttacaatgataatccttcgctt
gtcttccatactggatatggctacactccacaaatgccatatggaccatattcccctgtc
actactccttctgtcggtggagatgcaaacatgtattcaccccagcagtttccattctct
gggccaccttattatcagcagttggttccacctagtatgccatatattacttcaccaact
ccagtgtcacaaccagagcttaccactttactgggtgctgatcaacaaaatgacaacatg
ctttttggaccacggcctggttatcctcctccagtgggatcttttggtagaggcagcata
cctggaaattctggtgcacttggctttcatgatttacagcaagggtttgatggtctgaga
tctggaggactttggtcagattggtcaaaaacctctgacagacaacgacccctgactcca
atatcacctgctttatctccacaaccaattggcacatttgggtcctatgggcagaatgtt
ccaatggcatcccaacaacaaagatcattctatgggtttggatctggtttgaactcctac
aatagaggctatatgcacagtggttttaaccagagctccagttttggtagtgcatctatt
tctacgttgggaatgaacaatcaaggctgggtttctcttgacaacagcaaacgacgtggg
aggggtaatggctctctatgtggttgcaatggtaatcttgatatacttagtgagcaaaac
cggggaccaagggcctcaaagcctaggagtcaattgactgatgaacaaggatcttctgtt
gatgatagcaaacttagcaaggctgctgtcaagattctcaatgagtcatacaaccggcca
gattttgtcactgactacacagatgctaagtttttcatcatcaagtcatatagtgaagat
aatgttcacaagagcatcaagtacggtgtctgggccagcacaccaaatgggaacaaaaag
ttagattctgcttatcgtgaagctaaagagaagcaagagacatgcccggtgtttctctta
ttttcggtgaatgctagtgctcagttctgtggggtggctgaaatggttgggcctgttgat
tttgaaaagagtgtggattactggcaacaagataaatggagtggacagttccctgtcaag
tggcatattattaaagatgtcccaaacagtcaatttcgtcacattgtccttgaaaataat
gacaataagcctgtgaccaacagtcgagatactcaggaggtgaaattggaccagggaatt
gagatgttgaacatcttcaagaattatgaaactgatatgtcaatcctagatgattttgat
ttctatgaagatcggcagaaagccatgcaggaaaggaagtcaagacagcaagctagcctg
atgactgtaggagtagttggagaaaatgatcatagaaatgctgttacatatcccggtgat
ttcatcaagcagatgtctaagagctttgctcaagttgtttgcttggatgagggtaacaaa
gaaggcactggttctgatagacctacctctgcctctgagggctccatgggtgccagagtt
acactagaagatgccctcccagctgctgtctcttctgctcaaactggttag
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