Pistacia vera (pistachio): 116115100
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Entry
116115100 CDS
T07386
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116115100
Transcription machinery [BR:
pvy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
116115100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
116115100
NCBI-ProteinID:
XP_031257106
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MGVVTVSSSAARTPVGLSTKFQTHHSTLKRPLIVAFKGDKTDNTALVAPHELIPLPIEAP
KQQRKRLGKGSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIYKLSPAIRTSDVEDND
GVMRRGRRRRKRASEADTSKPVVRNMTKRPKRLNLDKRIELRKNKIDEVVEKRQKTKDVK
AENEKIEILVRDYSSSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKALIQVKEHLQK
DIGREPTDAELAEATSMTVVQVRRCLEVGRAARNKLIRHNLRLVLFVINKYFQDFANGPK
FQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRV
EIQRAKLELLFELQRLPTEEEIIKKVGISPERYREVMKASKPVLSLHSRHAVTQEEFINA
ITDVDGVETDKPRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNI
SREMVRKHEVKALMKLKHPTRVDYLRQYVV
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtctctagttcagctgcaaggactccagttggattaagcaccaag
tttcaaactcaccattcaacattaaagagaccattgattgtagcattcaaaggggataaa
acagacaatacagctttagtagcaccgcatgagctgattccattgccgatagaagcgcct
aagcagcaacggaagagactaggaaaaggcagcaaatctttgaagagggtgaaagcagtc
ttcactgatgaggcctctccatgtacatcggaagtggattacaatgaagcggctgctaaa
cttgaaaacatatacaagcttagtcctgcaattagaacttcagatgttgaagataatgat
ggtgtaatgaggagaggaaggcggaggagaaagagagctagcgaagctgatactagtaaa
ccggtagttaggaacatgactaagaggccgaaaagattgaatcttgataaaagaattgaa
ctgaggaagaacaagatagatgaagtggtggaaaaaagacaaaaaacaaaggatgttaag
gctgaaaatgagaagattgagatacttgtaagggattattcatcttcaactgatttggtt
agcttggattggaaaaaaatgaagatacctccagttctttcgtctacagagcatacttgg
ttgttcaagttgatgcagcctatgaaggcactcattcaagtaaaggagcatttacagaaa
gacatagggagagaaccaactgacgctgaattagctgaggcaacaagtatgactgtggtt
caagtaagaagatgcttggaggttggtcgagctgcacgaaacaagctcattagacacaat
ctccgactcgttttatttgttatcaacaaatattttcaagactttgcaaatggccccaaa
tttcaagacctctgtcaggctggtgtgaagggacttattacagcaattgatcgctttgaa
ccgaaaaggagatcccggctatcaacatatggtctgttttggattaggcatgctatcata
cgttcgatgacagtttcaagctttacacgcgttccgtttggccttgaatcagtcagagtg
gaaatccagagagcaaaacttgaattgttgtttgagcttcagagattgccaacagaggaa
gagataattaaaaaggtcggtatctcccctgagaggtaccgtgaagtaatgaaggcctca
aaacctgttctttctctccattctaggcatgcagtcacacaagaagagttcattaatgcg
attactgatgttgatggtgttgaaaccgacaaaccgaggcaaccagctcttctcaggctt
gcacttgatgatgtgcttgattctctaaagcctaaggagagcttggtgattagacagaga
tatggactagacgggaaaggcgatagaacactgggagaaattgcggggaacttaaatatt
tcaagagaaatggtgcgcaagcatgaggttaaggctctcatgaagctcaagcatcctact
cgggttgattatcttcgccagtacgtagtatga
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