Pistacia vera (pistachio): 116115577
Help
Entry
116115577 CDS
T07386
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116115577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvy02000
]
116115577
04147 Exosome [BR:
pvy04147
]
116115577
04090 CD molecules [BR:
pvy04090
]
116115577
Enzymes [BR:
pvy01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
116115577
Transporters [BR:
pvy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116115577
Exosome [BR:
pvy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116115577
CD molecules [BR:
pvy04090
]
Proteins
116115577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
DUF87
Motif
Other DBs
NCBI-GeneID:
116115577
NCBI-ProteinID:
XP_031257574
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAEAAAAAAAAAQAEEAEEMEDA
EEMEPPPAAVPFSKLFACADRLDWGLMIVGSLAAAAHGTALVVYLHYFAKVIEVLRIANT
QDQYHRFRELALTIVYIAVGVFVAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFD
TYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFVNCWQIALITLGTGP
FIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQA
TLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNKAHGGEIITALFAVILSGL
GLNQAATNFYSFDQGRIAAYRLFEMISRSSSTANQDGNSLPSVHGNIEFRNVYFSYLSRP
EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW
LRSQIGLVTQEPALLSLSIRDNIAYGREATSDQIEEAAKIAHAHTFISSLERGYETQVGR
AGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIA
RRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLKCEEAAKLPRRMPVRNYKET
AAFQIEKDSSASHSFQEPSSPKMQKSPSLQRVGMFRPTDGAFDSLESPTVHSPPAEKMME
NGLPLDASDKEPSIRRQDSFEMRLPELPKIDVQSANRQISNGSDPESPISPLLTSDPKNE
RSHSQTFSRPHSHSDDIPMKIRESKDTQHRKAPSFWRLAQLSFAEWLYAVLGSIGAAIFG
SFNPLLAYVIALIVTTYYRHDDHHHLRQEVDKWCLIIACMGIVTVVANFLQHFYFGIMGE
KMTERVRRMMFSAMLRNEVGWFDEEDNSADTLSMRLANDATFVRAAFSNRLSIFIQDSAA
VIVAVLIGMLLQWRLALVALATLPILTVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVR
NIYTVVAFCAGNKVMELYRLQLKTIFKQSFFHGMAIGFAFGFSQFLLFACNALLLWYTAI
SVRDGYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDD
NSALKPPNVYGSIELKNVDFCYPSHPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISL
IERFYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAE
MKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASS
SIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDTLVAK
NGLYVRLMQPHFGKGLRQHRLI
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcgagggggctgtttgggtggtccccaccgcatatacagccccttacgccg
gtgtcggaggtgtctgagcctccggagtcgccgtctccatacctggaccccggtgcggag
gcggcggccgcggcggctgctgctgctcaggcggaggaagcggaggagatggaggacgca
gaagagatggagccgccgccggcagccgtgccattctcgaagttgttcgcgtgcgcagac
cggctcgactgggggctcatgatcgttggctctcttgcagcagcggctcacggaacggct
cttgttgtgtacttgcattacttcgctaaagttattgaggtgttgaggatcgcaaatact
caggatcagtaccacaggtttagagagcttgctttgaccattgtttatatagctgtgggt
gtctttgttgctggttggattgaggtttcatgctggattttaactggagaacggcagact
gctgtcatcaggtcaaaatatgttcaagtattacttaaccaggacatgagtttttttgat
acttatggtaataatggggatattgtgagccaagtgttgagtgatgtgctgctcattcag
tctgctcttagtgaaaaagttggaaattatattcataacatggcaacatttttcagtggt
ctcgttattggatttgtcaactgttggcagattgctcttataacattaggcactggtcca
tttattgttgctgcgggagggatatcaaatatatttcttcataggcttgctgagaatatt
caagatgcatatgctgaagcagctagcattgctgaacaggcagtctcttacattaggacc
ttatatgcctttacgaatgaaactttggccaagtattcttatgcaacctcattacaagct
actttgagatatggtatactgattagtctggtgcaaggacttggacttggatttacatat
ggtcttgctatatgttcttgtgccttacaactttgggttggaagattcctagttacacat
aacaaagctcatggtggtgaaattataacagctttatttgctgtaattttaagtggcctt
gggctgaatcaagcagcaacaaacttctattcatttgaccaagggcggattgctgcttat
agactttttgagatgataagcagatcatcctcaactgctaatcaggatggaaacagccta
ccatcagtgcatggaaatatagagtttaggaatgtatatttcagctacctatctcgtcct
gagattcctatcttgagtggattttacctcactgtacctgctaaaaaagcagtagcactt
gttggcagaaatggatctgggaaaagcagtattatcccactcatggagcggttttatgat
cctacattaggagaggttcttttggatggggaaaatataaagaacttaaaactggaatgg
ctgagaagccaaataggacttgtcacccaggaacctgctttgctgagtttgagtatcaga
gataatattgcttatgggcgagaggctacttcggatcagatagaagaggcggctaaaata
gcacatgcacatacatttatcagctcacttgagaggggatatgagacacaggtgggtagg
gctggtttagccttgacagaagagcaaaagataaagctttctatagctagagcagtgctt
ttaaacccatcaattcttttgcttgatgaggtcactggtgggcttgattttgaagccgaa
agagctgttcaggaggctctggatctgcttatgttgggacgttcaaccataataattgct
cgacggcttagtcttataaggaatgctgattacatagctgtgatggaagagggtcaactt
gttgaaatgggtacacatgatgaactattaaccctggatggcctgtacgcagagcttctc
aaatgtgaagaagctgcaaaacttcctaggaggatgccggttagaaactacaaggagact
gcggctttccaaattgaaaaggattcttctgcaagtcacagcttccaagaaccatcatcc
cctaaaatgcagaaatcaccttctcttcagagagttggcatgtttaggcccacagatggt
gcctttgattcactagaatcccctacagtgcatagcccgccagcagagaaaatgatggaa
aatggtctgccattggatgcgtctgataaggaaccatcaatccgaaggcaggatagtttt
gaaatgagactaccagaattacctaagattgatgtacagtctgcaaaccgacaaatatca
aacggttcagacccggaatcccctatatcacctcttttgacatctgatcctaaaaatgaa
cgttcccattcacagacatttagtcgaccccatagtcactctgatgacattccaatgaag
attagagaatcaaaagatacacaacatcggaaagcaccatcgttttggagactggcacag
cttagttttgctgagtggctctacgctgttttaggaagcattggtgctgccatttttggt
tctttcaatcctcttcttgcttacgttattgcattgatagtgacaacatactatagacat
gatgatcatcatcacctacgacaggaagtagacaaatggtgcttgataattgcctgcatg
ggtatagtgacagttgttgccaactttttgcagcacttttactttggtattatgggggaa
aaaatgactgaacgagttaggagaatgatgttctcagcaatgctgaggaatgaagttgga
tggtttgatgaagaggataatagtgctgacacattgtccatgcgcttggcaaatgatgct
acatttgtccgagctgcttttagcaaccgcctttccatatttatacaggatagtgctgcc
gttattgtggctgtacttattgggatgttgctacagtggcgattggcacttgtagcatta
gcaaccttgccaatactcactgtgtctgccattgcccagaaattgtggcttgctggattt
tcaaggggcatccaggagatgcataggaaggcatctctagtccttgaggatgcagttaga
aatatttacactgtagtagcattttgtgctggtaacaaggtaatggagctctatagattg
cagctgaagacaatattcaaacagagtttctttcatggaatggccattgggtttgcattt
ggcttttcacagtttcttctttttgcctgtaatgctcttctcctttggtatactgctatt
tctgttagagatggctatatggatttgcctacagctctcaaggagtacatggttttctct
ttcgcgacgtttgcacttgtggaaccatttggattggctccatatatacttaagcggcgt
aaatctctcatttcagtttttgaaatcatagatcgagtgcctaagattgatccagatgat
aactcagcattgaagccccctaatgtttatggaagcattgagttgaaaaatgttgatttc
tgttatccaagtcacccagaagtgttggtattgagcaatttcagtctcaaagtcaatggg
ggacaaaccatagccgtggttggagtttcagggtctggaaaaagcactataatatctttg
attgagagattttatgatccagttgctggtcaggttctactagatgggcgagatcttaaa
ctttataacttgagatggttgagaaaccatttaggtcttgttcagcaggagcccattatc
ttctcaacgacaatcagggagaatattatatatgcaaggcataatgctagtgaagctgag
atgaaagaggctgcaagaatagctaatgctcaccatttcatcagcagcttgcctcatggt
tatgacacacatgtagggatgaggggtgtggacttgacccctggacaaaaacagagaatt
gctatcgcccgagtggtgctgaagaatgcacccatcttgttactggatgaagctagttca
tccattgagtctgagtcaagtcgagtagtgcaggaggctcttgatacactgataatggga
aacaaaacaaccatactgatagctcatagagctgcaatgatgaggcatgttgacaacata
gtagttcttaatggagggcgaatcgtggaggaagggacccatgatactttggtagcgaaa
aatggtttgtatgtccgtttgatgcaacctcactttgggaagggtttacggcaacatcga
ttgatatag
DBGET
integrated database retrieval system
