Pistacia vera (pistachio): 116115618
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Entry
116115618 CDS
T07386
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvy03036
]
116115618
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
116115618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
116115618
NCBI-ProteinID:
XP_031257609
LinkDB
All DBs
Position
Unknown
AA seq
1860 aa
AA seq
DB search
MSSFTSNSASGSGSGAGPASWGIGLSNTIHSEVAPCLPLPSLQVFCGATDPDLCLFDEVS
TGSYGSYRSLNRPEILAQSSRIADLLRETDVSYLHLRDQLNPVSCSYVEPLELHNQVLQC
DAEAFEYVTPGQIKEQVSGRAVFERKDSRTSVPVTSSGPVVFERKDYQTSVPVTSSGPAV
FERKDFQASVPLTSGFQRDYNESQNHQLNRVLVNEISTSSSRKPKVKKRAGNDFSSSAQR
DPTELRDAAVESFCEMLEDFCGRATTPTDDQNEPEWLSLPVADIRMLVNEIMSVRAKKLL
HLVSVDILVRLLQVLDHQIHRAEGLSIDEREHQDSGAVATVFCALESIHAALAVMAHDQM
PKQLYKEEIIERILEFSRHQITDVMSAYDPTYRALHKPSENGAFEADEDEEFDADFGSSS
KRRRSIKTVKVKKSALNKVSGAMNSILQKLCTILGLLKDLLLIEKLSDSCILQLVKTSFT
TFLVDNIQLLQLKAIGLISGIFYSYTQHRTYVIDEILQLLWKLPSSKRALRTYHLPDEEQ
RQIQMVTALLIQLVHSSANLPEAFRKASSGNSILEVSIDAIYPTKCHEAATETCCLFWTR
VLQRFTSVKTQDANELKVMMENLVMDLLTTLNLPEYPASAPILEVLCVLLLQNAGLKSKD
ISARSMAIDLLGTIATRLKQEAVLCSRDRFWILQELIEEDNVDKNYAKDACSICLDGRVE
KKLFVCQVCQRLFHSDCMGVREHEVPNRGWYCQFCLCRNQLLVLQSYCKSQCKDDGKKSQ
NQSENNSEASDTITKLEIVQQMLLNYLQDVVSADDINLFVRWFYVCLWYKDDPKSQQKPM
YSLARMKSKAIVRQSGTVSSLLTRDSIKKITLALGQNNSFSRGFDKILQVLLASLRENSP
IIRAKALRAVSIIVEADPEVLCDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDVG
LKYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNTNFSGFTTACNEIISRVSDDESSIQDL
VCKTFYEFWFEEPSGLQTQYFGDGSSVPLEVAKKTEQIVEVLRGMPNNQLLVTVIKRNLA
LDFFPQSAKAAGINPVYLASVRRRCELMCKCLLEKILQVEEMNSEGVENRTLPYVLALHA
FCVVDPTLCAPDSDPSQFVITLQPYLKSQVDNRVVAQFLESIIFIINSVLPLIRKLPQSL
IEELEQDLKNMIVRHSFLSVVHACIKCLCSVSKVSGKSSSVIAYLIQVFFKYLDGQKSDS
NQFQQVGRSLFCLGSLIRYGNFLLSTSNDKKFDVGSSLSLFKRYLQMDDFSVKVRSLQAL
GFVLIARPEYMLEKDIGKILEATLAPSSHIRLKMQALQNVYEYLLDAESQMETDKVSNSE
VQYAAEDGSVPVAAGAGDTNICGGIVQLYWDKILGRCLDANEQIRQSAVKIVEVVLRQGL
VHPITCVPYLIALETDPQEVNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFLFIQSLGG
GSPDSLNQKFQSKAAGNMKGKSDGGSLSQARLGVSRIYKLIRGNRNSRNKFMSSIIRKYD
NLSLDNSVIPFLIYCTEVLALLPFTLPDEPLYLIYTINRIIQVRAGTLEANMKAMSTGLL
QRDAQKTTHENGMFQQESYQRVYNHITAMDLNGTMKEEPAAEPIFYQMTSIDLNGTIQPE
PIVQTISHHTPPMEAKMHDTISVESCRISEEDLQKIQIDSIAATALQLLLKLKRHLKIVY
SLNDARCQAYSPTEVQKPGEILSRQSIAFDISDIRVTLPSTYQEFIQRYQEFKNALKEDT
VDYSVYTANIKRKRPTPRKGPRSGRMTGMDDEDGYSDEEYGVGVRRMNNSGRKGNSYRRR
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctttacaagtaattcagcttcgggctcgggctcaggtgcgggcccggcctcc
tggggcatcggactgtccaacaccatacactccgaagtagctccgtgcttgccgttgccg
tcgcttcaggtcttctgtggcgcgacggatccggacctctgtctgttcgatgaagtgagt
actggtagttatggtagttataggtcgttgaatcgtcccgagattctcgctcagtccagt
cgaattgctgatctgcttcgcgaaaccgatgtttcttatttgcatcttagagaccagcta
aatccagtttcgtgtagctatgtggagcccttagaacttcacaaccaagttctccaatgt
gatgctgaagcttttgagtatgtcactcctggtcaaattaaggagcaagtctctggtcgt
gctgtttttgaaaggaaagactctcggacaagtgtacctgttacaagttctggtccggtt
gtttttgaaaggaaagactatcagacaagtgtacctgttacaagttctggtcctgctgtt
tttgaaaggaaagactttcaagcaagtgtacctttaacaagtggtttccaaagggattat
aatgaatctcagaatcaccagctcaaccgtgttcttgtaaacgaaatatccacatcatct
tccaggaaaccaaaagtcaagaagagagctggtaatgacttctcttcatcagctcaacga
gatcctactgagcttcgagatgctgccgttgagagcttctgtgagatgttggaggacttt
tgtggcagagctacaactcccactgatgatcagaatgaacctgagtggttatctttacct
gttgctgacattagaatgcttgtaaatgaaataatgtccgtacgtgcaaagaagcttcta
catttggtttcagtagatattcttgtgagactattacaggtccttgatcatcaaatacat
cgagcagaaggtttgtcaattgatgaacgagagcatcaagattcaggtgcagttgcaacg
gtcttttgtgccctggaatcgattcatgcagctttagcagtaatggctcatgatcaaatg
ccaaagcagctttacaaggaagagatcattgaaaggattttggagttctcgaggcatcaa
ataacagatgttatgtcagcttatgatccaacataccgtgctctgcataaaccaagtgaa
aatggagcatttgaagctgatgaagatgaagaatttgatgctgactttggttcgtctagc
aagagaagacgcagtatcaagactgtcaaagtgaagaaatctgctttgaacaaggtctct
ggtgctatgaattccatacttcagaagctctgcactattcttggtttactcaaggatctg
ttgttgatagagaaattatctgatagttgcattttacaactggtgaagacaagctttaca
acatttttggtggacaatatccagctcttgcagttaaaggctattggtttaataagcggg
atattctactcatacactcagcatcgaacgtatgtgatagatgaaatacttcagcttctt
tggaagttaccatcctctaagcgagcattgagaacgtatcacctgcctgatgaggaacag
aggcagattcagatggttactgcattgctgattcagttggttcacagtagcgcaaacctc
cctgaagctttcaggaaagcatcgagtggtaattccatcttggaagtttcaattgatgct
atttatcccaccaaatgtcatgaagcagcaacagagacatgctgtcttttctggacgcgt
gttcttcagcgctttacaagtgtaaaaactcaggatgccaatgagctgaaagtaatgatg
gagaatcttgtcatggatttactgacaacattgaatttaccagaatatcctgcttctgct
cctattctggaggttctttgtgtcttactgcttcagaatgctggactgaaatccaaagac
atctcagcacgatcaatggccattgaccttcttggtaccattgctaccaggttgaagcag
gaagctgtcctctgcagtagggacagattctggatattacaggaactgattgaggaggat
aatgtggacaagaattacgctaaagatgcatgttctatttgtttggatggaagagttgaa
aaaaagttgtttgtatgtcaagtttgtcagagactttttcattctgactgcatgggggta
agagaacatgaagtacccaatcgtggttggtactgtcagttttgtctctgccggaatcaa
cttctagtattacaatcatactgcaagtcacagtgcaaggatgatggaaaaaagagtcag
aatcagtcggaaaacaattctgaagcttctgatacaattacaaaacttgaaattgttcaa
cagatgctcttgaattaccttcaagatgttgtctctgctgatgatattaacctctttgtt
cgttggttttatgtgtgcctatggtacaaggatgacccaaaatctcaacaaaagcccatg
tactctcttgctagaatgaaatctaaagcaatagtgcgtcaatctggaactgtttcatcc
ttgttgacaagggactccatcaagaagatcactttagcactagggcaaaataattctttc
tctagaggctttgataagattcttcaagtgcttcttgctagcttaagggaaaattctcct
ataatcagggctaaggctttacgagcggttagtataattgtggaagctgatcctgaggtg
ttgtgtgataaacgtgtacaattagctgttgaaggaagattttgtgactcagcaatatca
gtaagagaggcagcattggaacttgttggccggcatattgcttcacatcccgatgttggt
ttgaagtattttgagaaagtagcagagaggataaaagatacaggagtgagtgtccggaaa
agagcaatcaaaatcatccgagatatgtgcacttcaaatactaacttctctggatttaca
actgcttgcaatgagatcatttctcgtgttagcgatgatgaatcaagtattcaggatctt
gtctgcaagacattttatgagttctggtttgaggaaccttctggattgcagactcagtat
tttggagatggtagttctgttccattggaggttgctaagaagactgagcagattgttgaa
gtgttaaggggaatgccaaataatcagcttcttgtcactgtcattaagcgcaacttggcc
cttgatttttttccacagtcagctaaagctgctgggatcaaccctgtttatcttgcatca
gtacgtagacgatgtgaattaatgtgcaagtgcttattggaaaaaatattgcaggtagag
gaaatgaatagtgagggagtggagaatcgtacgcttccttatgtgttggccttgcatgca
ttttgtgttgtggatcctacactttgtgctccggattctgacccctcacaatttgtcatc
actttacaaccatatctaaagagtcaggttgataaccgagttgttgcacagtttctggag
agtattattttcataattaattctgtcctgcccttgattcgaaagttacctcaaagtctg
attgaagaacttgaacaagacttgaagaacatgattgtacgacattcttttttgagtgtt
gtccatgcttgcataaagtgcctgtgctctgtgagtaaagtatcaggaaaaagttcgagt
gttattgcatatcttattcaggtttttttcaagtatttggatggccagaagtctgacagc
aatcagtttcagcaagtggggcggtctcttttttgtcttggatcgctcatccgttatggg
aattttttgttaagtacctcaaatgacaaaaaatttgatgttggtagcagtcttagtttg
ttcaaaagataccttcaaatggacgattttagtgtaaaggttagatctttgcaggcttta
ggctttgttttgattgctaggcctgagtatatgttggagaaggacattgggaagatatta
gaggcaacattagcaccttcttctcatatccgtcttaagatgcaagcattgcaaaatgtg
tatgaatatctacttgatgcggaaagtcaaatggaaacagataaagtcagtaatagtgaa
gttcaatatgcggcagaagatggcagtgtgccagttgctgctggtgctggtgatactaac
atctgtggaggtatagttcagttgtactgggataagattttgggaagatgcttggatgct
aatgaacaaattcgccagtctgctgtcaagatagtggaagttgtgctacgccaaggtctt
gttcatcctattacttgtgttccatacctaatagcccttgaaacagatcctcaggaggtg
aactcgaagttggcgcatcatttactgatgaatatgaatgaaaagtaccctgctttcttc
gaaagccgtctgggggatggccttcagatgtcatttcttttcattcagtcccttggtggt
ggttctccggacagtctaaaccaaaagttccagtccaaggctgcaggaaatatgaaaggg
aaatctgatggtggctctctaagccaagccaggcttggagtttctcgaatttataagctt
attcgtggaaacaggaattcgaggaacaaatttatgtcatctattatccgaaaatatgat
aatcttagcttggataattcagttatcccttttttgatatactgcacagaagtccttgct
ttgctcccattcacattacctgatgaacccctttacttaatctatactataaatcgaatt
atacaagttcgggctggcacactcgaggcaaatatgaaagccatgagtacaggtttgtta
caaagagatgcacagaagactacgcatgagaatggaatgtttcaacaggagtcatatcag
cgtgtttacaatcatatcactgcaatggatttgaatgggacgatgaaggaagagccagct
gctgagcctattttctatcaaatgacatcaattgacttgaatgggacaattcaaccagag
cccattgttcagacaatctcacatcatactccaccaatggaggcaaagatgcatgataca
atttcagttgaatcttgtagaatatctgaagaggatctacagaaaatccagattgactcg
attgctgctactgctttgcaactactgctgaagctgaagaggcacctaaagattgtgtat
agtctgaatgatgcccggtgtcaggcatattctccgactgaagtccaaaaacctggagaa
atcctttctagacagagcattgcctttgacatcagtgatatacgtgtcaccttaccatct
acttatcaagaatttatacagagataccaggaattcaaaaatgctttaaaggaagatact
gttgactactcggtttacacagcaaacatcaaaaggaagcgacctacgcccagaaaaggg
ccaagatctggacgaatgactggtatggatgatgaagatggttatagtgacgaagaatat
ggagttggagttcggaggatgaataatagtggccgaaaaggtaacagctatagaaggaga
tag
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integrated database retrieval system
