Pistacia vera (pistachio): 116115919
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Entry
116115919 CDS
T07386
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116115919
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvy01007
]
116115919
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvy03016
]
116115919
Enzymes [BR:
pvy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
116115919
Amino acid related enzymes [BR:
pvy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116115919
Transfer RNA biogenesis [BR:
pvy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116115919
Prokaryotic type
116115919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
116115919
NCBI-ProteinID:
XP_031257915
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MISQMTLSVSTPSLLSSSRLNPLIFSRRRRSIWLSQWHFNVIKPRFFAVAAAENGGLPKS
FDFTSEERIYNWWESQGYFKPNCEREGDPFVISMPPPNVTGSLHMGHAMFVTLEDIMIRY
HRMKGRPTLWLPGTDHAGIATQLVVERMLASEGLKRVELSRDEFTKRVWEWKEKYGGTIT
NQIKRLGASCDWTRERFTLDDQLSRAVIEAFIRLHEKGLIYQGSYMVNWSPSLQTAVSDL
EVEYSEEPGTLYHIKYRVAGSNDFLTVATTRPETLFGDVAIAVNPKDDRYAKYIGMMAIV
PMTYGRHVPILSDKHVDKEFGTGVLKISPGHDHSDYLLARKLGLPILNVMNKDGTLNDVA
GLYCGLDRFEARKKLWSELEETGLAVKKVPHTLRVPRSQRGGEVIEPLVSKQWFVTMEPL
AEKALRAVEKGELTIMPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIVGKDCEEEY
IVARDADEALEKAREKYGKNVEVYQDPDVLDTWFSSALWPFSTLGWPDVSTEDFKKFYPT
TMLETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPLDT
IKEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDTSAWE
TILAYKFDKEESLHGAPLPESWLVSKLHMLIDTVTASYEKFFFGEVGRETYDFFWSDYAD
WYIEASKARLYHSGRDSEALLAQAVLLYVFENILKLLHPFMPFVTEELWQALPRQKEALI
VSSWPQTSLPRNLNSIKRFENLQALTRAIRNARAEYSVEPARRISASIVANEDVIQYISK
EKEVLALLSRLDLQHIHFTESPPGDANQSVHLVASEGLEAYLPLADMVDISAEVQRLSKR
LSKMRSEYEGLVARLSSPKFIEKAPEDVVRGVQEKAAEAEEKINLTKNRLAFLQSTVLVT
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgatatcacaaatgactctctctgtctctactccttctctcttatcttcctccagactc
aatcctctcatcttctctagacgacgccgttccatttggctctcccagtggcatttcaat
gttatcaaaccaagattctttgcagttgctgcagcggagaatggtgggctgccaaagtca
tttgattttacttcagaggaaagaatatacaattggtgggagtctcaaggctattttaag
ccaaactgtgaacgggaaggtgatccttttgtgatatcaatgccacctcctaatgtcact
ggttcgctgcacatgggccatgcaatgtttgtgactcttgaggatataatgattagatat
catcgaatgaaaggaagaccaacactttggcttccggggactgatcatgctggaattgca
actcagttggttgttgaaagaatgttggcgtctgaaggactaaaaagagttgaattgagt
agagatgagttcaccaaacgagtttgggagtggaaagagaagtatggtggaaccattact
aatcagattaagagacttggtgcttcttgtgattggactagagaaaggttcacccttgat
gaccagctaagtcgagctgttattgaggcgtttattaggcttcatgagaaaggattaatc
tatcaagggtcttacatggttaactggtctcctagtctacaaactgcagtttcagacttg
gaagtagaatattctgaagagcctggaaccctatatcatattaagtaccgtgttgctgga
agtaatgacttcttgactgtagcaacgacacgcccagagactttgtttggggatgtagct
attgcagtaaaccctaaggacgatcgttatgccaagtatataggtatgatggcgattgta
cctatgacatatggtcgtcatgtccctattctaagtgacaagcatgttgataaagaattt
gggactggtgtattgaagataagccctggccatgatcatagtgactacctccttgcaaga
aaacttggtctcccaatccttaatgtgatgaacaaggatgggacacttaatgatgttgct
ggactgtactgtggtcttgatcggtttgaggcacggaagaaattgtggtcagaacttgag
gagacaggcctagctgtaaagaaggtgcctcatactttacgagttcctagatcccagcgt
ggtggagaagtaatagaaccactagtaagtaagcagtggtttgtaaccatggagccttta
gctgaaaaagcccttcgtgcagttgaaaaaggagaactaaccattatgcctgaaagattt
gagaagatttacaatcactggctatcaaatattaaggattggtgtataagcaggcaactg
tggtgggggcaccgtataccagtttggtatattgttggaaaagactgtgaagaggaatat
atagttgctagggatgctgatgaagctcttgagaaagctcgtgaaaaatatggtaaaaat
gtggaggtatatcaggatccagatgttcttgacacctggttttcaagtgcgctatggcct
ttcagtactcttgggtggccagatgtgtccacggaagactttaagaagttttatccgaca
acaatgcttgaaactgggcatgacatattgttcttttgggtggcaagaatggtcatgatg
ggaattgagttcacggggactgttccattttcatatgtttatcttcacgggctgatccga
gactcccaagggagaaaaatgtcaaaaacattggggaatgtgatagatccacttgataca
atcaaggagtttggcacagatgccttacggttcactcttgctttaggaactgctggtcag
gacctcaatttgtctacagagagattgacctcaaacaaggcctttaccaacaaattatgg
aatgctggcaagtttgttttgcagaatttgccaagtcagagtgatacatctgcttgggaa
actattctagcttataagtttgacaaagaagagtccctgcatggtgcaccattaccagaa
tcttggctggtctcaaaactccatatgcttattgatacagtcactgcaagctatgaaaaa
tttttctttggagaggttggaagagaaacatatgatttcttttggagcgattatgccgat
tggtacattgaagccagtaaagctcgcctgtaccactcgggacgtgattcagaggcttta
ctagcacaggcagttctattgtatgtttttgaaaacatactaaaattgctacatccattc
atgccatttgtgactgaggaactgtggcaggcacttccaagacagaaagaagcccttata
gtatcgtcttggccccaaacttcacttccaaggaatctgaactcaataaaaagatttgaa
aatctacaagcattgactagggcaattcggaatgctagagctgaatattctgttgagcca
gctaggcgtatatctgcatcaatagttgcaaatgaagatgtcatccagtatatatctaaa
gaaaaggaggttttagctctcctatcaagactggatttacaacatatacattttactgaa
tctcctcctggggatgcaaatcaatcagttcaccttgttgccagtgaaggactagaggcg
tatctcccgcttgctgatatggtggatatttctgctgaagtccagcgcctttccaaacgc
ctttcaaagatgcgatcggagtatgaaggacttgtagctcgcctcagttccccaaaattc
atagaaaaagctcctgaggatgttgttcgaggggttcaagaaaaagcagcagaagcagaa
gagaaaataaatctgacaaagaaccgtttggcttttcttcagtcaactgttttggtaaca
aaatag
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