Pistacia vera (pistachio): 116115956
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Entry
116115956 CDS
T07386
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00900
Terpenoid backbone biosynthesis
pvy01100
Metabolic pathways
pvy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
116115956
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvy01006
]
116115956
Enzymes [BR:
pvy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
116115956
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
116115956
2.5.1.29 geranylgeranyl diphosphate synthase
116115956
Prenyltransferases [BR:
pvy01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
116115956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
HTH_PafC
UbiA
EcsC
Motif
Other DBs
NCBI-GeneID:
116115956
NCBI-ProteinID:
XP_031257942
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MRPQPNLIISHVRLYNDKASFYSDPVPMAFSASHSNSPILLKNPINDFKNLVKIPSGHLK
FFPRNTQAPVHATKSALVQPFTSEESNSKSIDMPLPIFQFEEYMTMKAKQVNRALDEAVP
LQLPVKVHEAMRYSLLAGGKRVRPVLCIASCELVGGDESSAMPIACALEMIHTMSLIHDD
LPCMDNDDLRRGKPTNHIVFGEDTAILAGDALLTLAFEHVAAKTFNVSPDRVVQAIAELG
SAVGSKGLVAGQIVDIDSEGKNVSLAELEYIHVHKTAKLLEASVVCGAIMGGGNMIDIER
VRNYARCIGLLFQVVDDILDVTKSSAELGKTAGKDLVSDKATYPKLMGIDNAKKLATELV
AQAIEELAYFEDARAAPLYHLANYIASRQN
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccacagccgaatttaattatttcacacgtgcgtttgtacaatgataaagctagc
ttctattcagacccagttccaatggcattctctgcaagtcatagcaattcaccgatcctc
ctgaagaatcccattaacgatttcaaaaatctcgttaaaatcccatctgggcacttgaaa
ttttttcctaggaatacccaagccccagtccatgctacaaaatcagctttggtgcagcca
ttcacatctgaagaatcaaactccaagtcgatagacatgcctttacccatattccagttt
gaagaatacatgaccatgaaggcaaaacaagttaacagagcactcgatgaggcagtgccc
ttgcaacttccggtaaaagtacatgaagctatgagatactctcttctcgccggcggcaag
cgtgtccgcccagttttatgcattgcctcatgtgaattagtgggaggagatgaatcctca
gctatgccaatcgcttgtgcgctagagatgattcatacgatgtcgttaattcacgatgat
ctcccgtgcatggacaatgatgatcttcgacgaggaaagccgacaaatcacatagttttt
ggtgaagataccgcaattcttgctggtgatgctctcctcacccttgcctttgaacatgta
gcggccaagacgttcaatgtttcacctgaccgcgtggttcaagccattgccgaactaggt
tcagccgttggctcaaaagggcttgtggcagggcaaattgtggacattgacagtgaaggg
aaaaatgtgagtttggccgaattggaatacattcatgtgcacaaaactgcaaagcttttg
gaggcatcggtggtttgcggagcaataatgggaggaggaaacatgattgatatagaaaga
gttagaaactatgcaaggtgtatagggttgctatttcaagttgtggatgatatattggat
gttacgaagtcgtctgctgaattggggaagacggctgggaaggatttggtgagcgataag
gctacatatccgaagttgatgggcatcgacaatgctaagaaacttgccactgaactggtg
gctcaagccattgaagagcttgcctattttgaagatgccagggctgccccattgtaccat
ttagctaactatattgctagtcgacaaaattaa
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