Pistacia vera (pistachio): 116116375
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Entry
116116375 CDS
T07386
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvy03009
]
116116375
03036 Chromosome and associated proteins [BR:
pvy03036
]
116116375
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116116375
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
Pre-60S particles
Helicases
116116375
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116116375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
116116375
NCBI-ProteinID:
XP_031258319
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MPSLAPFDVNGTKEERKMKKKIALQSLDETDFSAEKKKKKDSKNKADDSERSKKKDSKKR
KVMEEDDEERSETSSELGEPVNLKSDKKKQKKAKVDAEVEEEEKSENPNAISRFRISEPL
REKLKSKGIESLFPIQATTFEMVLDGSDLVGRARTGQGKTLAFVLPILESLVNGPTKGLR
KTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAMGLSSCCLYGGAPYHSQEFKLKKGVDV
VIGTPGRVKDHIERGNIDFTSLKFRVLDEADEMLRMGFVDDVELILGKVEDANKVQTLLF
SATLPDWVKHIASKFLKPNKKTIDLVGNEKMKASTNVRHFVLPCSSTARAQVIPDVIRCY
SSGGRTIIFTETKESASQLADVLPGARALHGDIQQSQREVTLSGFRSGKFMTLVATNVAA
RGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAVMLYDPRRSNVSKIERESGVK
FEHISAPQPADIAKAVGVEAAETITQVSDSVIPVFKSAAQELLDASGLSAVELLSKALAK
TAGYTEIKTRSLLGSLDNHVSVLLEAGKPIYTPSFAYGVLRRFVPEEKVESVQGMTLTAD
GKGAVFDVAVEDLDLFLSGQENAANVSIEVLKELPRLQEREQPRGRFGGGGRGGFGGGSR
FSGGRGGGFSDRRNNRFSGGGRGGNNGRRW
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgccttctttagcaccctttgacgttaacggaacgaaagaagagaggaagatgaagaag
aaaatagctcttcaaagtttagacgaaactgacttttcggcggaaaagaagaaaaagaag
gactcaaagaataaggcggatgactctgaaaggtctaagaagaaggatagcaagaagcga
aaggttatggaagaagatgacgaagaaagaagtgaaacgagctcggaattaggcgagcct
gtgaatttgaaatcggataagaagaagcaaaagaaagcgaaagtagatgctgaggtggaa
gaggaggagaagagtgagaatccgaatgctatttctcggtttcgaatatcggaaccattg
agagagaaactcaagtctaagggtattgagtctctgtttccaattcaggccaccactttt
gaaatggttcttgatggctctgacttagttggacgtgcacgcactggtcagggcaaaaca
ctggcctttgtgttgccaattttagagtctctagttaatgggccgacaaagggattgagg
aagaccggatatggcagggcaccaagcgttttggtacttttaccgactagagaattggct
aaacaggtgcatgaagactttgatgtttatggtggggcaatggggttatcctcatgttgt
ttatatggaggtgctccctatcattctcaggagtttaaattaaagaaaggagttgatgta
gtcataggaacaccaggccgtgtcaaggatcacatagagaggggaaatattgattttact
tctttgaagtttcgggttcttgatgaggctgatgaaatgctaaggatgggttttgttgat
gatgtcgaacttattcttggcaaagttgaggatgctaataaagttcagacacttctcttc
agtgctaccttgccagactgggtgaaacatatcgcttctaagtttctcaagccaaataag
aaaactattgatcttgttggcaatgagaaaatgaaggctagtacaaatgtaagacatttt
gttcttccctgttccagtacagcaagagctcaagttattccggatgttattcgttgttat
agcagtggaggccgcacaattattttcaccgagacaaaggaatctgcttctcaacttgct
gacgtgttaccgggagcacgagctttacatggggacatacagcagtctcagcgtgaggtc
acactttctggtttcaggtcaggcaagtttatgacgttggtggctacaaatgtggcagca
cgaggattagacatcaatgatgtgcagttaattatccagtgtgagcctcctcgtgatgta
gaagcctacattcatcgatctggacgtacaggaagagcaggcaattctggagtcgctgtt
atgctttatgatcctagaaggtcaaatgtatctaagatagaaagagaatctggtgtaaaa
tttgagcacatatctgcacctcagccagctgatatagctaaagctgttggtgtggaagct
gctgagacaataacccaagtttctgacagtgtaattcctgtgttcaagtctgctgcccag
gagctactggacgcttccggtctatcagcagtggaattgctttcaaaagcacttgccaag
actgctggttataccgagataaagaccagatcactacttggttctttggacaaccatgtt
tcggtgcttcttgaagctgggaagcccatctacacaccatccttcgcttacggtgtattg
aggagattcgtgcctgaggagaaagtagagtcagtgcagggtatgactctcacagctgat
ggaaagggtgcagtgtttgatgtggcagtggaagatttggacttgtttctttctggtcag
gaaaatgcggctaatgtgagcatagaggttttgaaagaattaccacgcttacaagaaaga
gaacagccgaggggaagatttggtggtggtggtcgtggtggctttggtggtggtagtaga
ttttctggtggcagaggtggtgggttttctgatagaagaaataacagattttctggtggg
ggtagaggtggtaataacggtaggagatggtaa
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