KEGG   Pistacia vera (pistachio): 116116699
Entry
116116699         CDS       T07386                                 
Name
(RefSeq) autophagy-related protein 18a-like
  KO
K22991  WD repeat-containing protein 45
Organism
pvy  Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvy04131]
    116116699
Membrane trafficking [BR:pvy04131]
 Autophagy
  Other autophagy associated proteins
   Others
    116116699
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st BCAS3_WD40 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR19_1st Beta-prop_IFT140_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_RIG_2nd PEP5_VPS11_N Beta-prop_RSE1_2nd Ge1_WD40 Izumo-Ig Beta-prop_TEP1_2nd
Other DBs
NCBI-GeneID: 116116699
NCBI-ProteinID: XP_031258611
LinkDB
Position
Unknown
AA seq 438 aa
MATLSEYSSPWPDPNPDPNLNSNPNPNPNPNSDFIPSDDQLRNLDSYSSMSQDQSDPFSP
AIPNTNPNFHTPLSSPSESTSPASAPPPSLLHLSFNQDHGCFAAGTDHGFQIYNCDPFRE
IFRRDFDRGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEV
RSVKLRRDRIVVVLEQKIFVYNFADLKLLHQIETISNPKGLCAVSQVTGSLVLVCPGLQK
GQVRVEHYGSKRTKFIMAHDSRIACFALTQDGQLLATASTKGTLVRIFNTLDGTLLQEVR
RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSPRTDNQRTSSDPSFTSSPTS
SLSFIKGVLPKYFSSEWSVAQFRLVEGSAYIVAFGHQKNTVVILGMDGSFYRCEFDPVNG
GEMTQIEYHNFLKPEAVF
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggctactctttctgagtattcatctccttggccagaccccaatccagatcccaatctc
aattccaatcctaaccctaaccctaaccctaattctgatttcattccttccgacgaccag
ctccgtaaccttgattcttattcttcaatgtctcaggaccaatccgaccctttttctcct
gctattcccaataccaaccccaattttcacaccccgctttcttcccctagcgaatccacc
tcacctgcatcagcgccgccgccatccctccttcacctctccttcaaccaagaccatggc
tgtttcgctgccggcaccgaccacggcttccagatctacaattgtgaccctttccgggag
atatttcgtcgagattttgaccgcggtggagggatcggagtcgttgaaatgcttttccga
tgcaatatattagcccttgttggtggtggaccggacccacaatatccccttaataaggtg
atgatctgggacgaccatcaaagccgttgcatcggtgagctgtcgtttaggtcagaggtt
cgatcggtgaaactccgtcgtgacagaatcgtggtggttttggaacagaagatattcgtg
tacaatttcgcagatttgaagctgttacatcaaattgaaaccatttcaaatccgaaaggg
ttatgtgcggtgtctcaggtgactgggtcgttggtgttggtgtgtcctgggctacagaag
ggacaggttagggtggaacattacggttccaaaaggacaaagtttattatggctcacgat
tcaagaattgcgtgtttcgcgttgactcaagatggacagttgcttgcaacggccagtacc
aaaggaacccttgttcgcatttttaatactcttgatggtaccttgctgcaagaggtgagg
aggggcgctgatagagcggagatttatagtctggccttctcttcaaatgcccaatggctg
gcagtctcaagtgataagggcactgtccatgttttcaatcttaaggttaattctggatcc
ccaagaactgacaatcaacgaacttcatctgatcccagttttacctcatcgcctacctca
tccctctctttcatcaaaggggtgttgcccaagtatttcagctcagagtggtcagtggct
cagttccgcttggttgagggttctgcatacattgttgcctttggtcaccaaaagaataca
gtggtaatccttggcatggatggaagcttctatcgatgcgaatttgacccggttaatggt
ggagaaatgacgcaaattgaatatcacaactttctaaagccagaagcagtgttctga

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