Pistacia vera (pistachio): 116116719
Help
Entry
116116719 CDS
T07386
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116116719
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116116719
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116116719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
116116719
NCBI-ProteinID:
XP_031258640
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MKIVTYNVNGLRQRISQFGSLRKLLDSFDADIICFQETKLRRQELKSDLVLADGYESFFS
CTRTSDKGRTGYSGVATFCRVKSAFSSDEVALPVAAEDGFTGVLDTSGSKIAEGLEEFAK
DELCRVDGEGRCIITDHGHFILFNIYGPRAASDDVDRIQFKLMFFKILQKRWEFLLCQKR
RIFVVGDLNIAPAAIDRCEAEPDFEKNEFRRWFRSMLVESCGSFLDVFRAKHPERRDAYT
CWPSNTGAEQFNYGTRIDHILCGGPCFHQKHDLEGHNFVTCHVKECDILVEYKRWKPGNT
PRTRWKGGMNIKLEGSDHAPVYMSFGEVPVIPQHSTPSLASRYLPMICGLQQTLVSVLMR
REVAKEAKSYEALSSLTTQSMKMESFSECAERSFNCHEPGISPGDHCSFANQEPKGEMWK
MHENHRDLPNEAVCNTTITAGSCKQINLIPSDRAKKKARKIQSSQLSLRSFFQKSPNPRH
DVDNLVTDTSLHQADVPESPHRKTPVTDYNNCHAELHDVNSSGCSQDQDEQDGNCSLDKE
KNNVALLEWQRIRQLMENSIPLCKGHKEPCVARVVKKPGPTFGRRFYVCARAEGPASNSE
ANCGYFKWASSKSKHKK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacatacaatgttaatgggttaagacaacgcatctctcagttcggctct
cttcgcaaactactcgactctttcgatgccgatatcatctgcttccaggagacaaaatta
agaagacaagaactaaaatcggatttagtattggctgacggatatgaatcttttttttct
tgcacgcgtacttctgataaaggccgaactggctattccggagtagcgacattttgccgt
gtgaaatcagctttttcgagtgacgaagtggcactgccagtggcagcagaagacggcttt
actggtgttttagatacttctggaagtaaaattgcggaaggtcttgaggaatttgcaaaa
gatgagctctgtagggttgatggtgagggacgttgtataatcacggatcacggtcatttc
attctgtttaatatttatgggccacgagctgctagtgatgatgtggacaggattcagttt
aagcttatgtttttcaagatattgcagaaaagatgggagtttctcttgtgtcaaaagagg
aggatatttgtggttggtgatctcaacattgctcctgctgccatagatcgctgtgaggcc
gaaccggattttgaaaagaatgagttcagaagatggtttagatctatgctggtggaatcc
tgtggctcctttttagatgttttcagagcaaaacatcctgagagaagagatgcatacaca
tgctggccatctaatacaggtgctgagcaatttaattatgggaccagaattgaccatatt
ctctgtggtggaccatgctttcatcaaaagcatgacctggaaggccataactttgtaact
tgtcatgttaaggagtgtgacatactagtagagtataaacggtggaaacctggaaataca
ccgagaaccaggtggaaaggagggatgaatatcaaattagaaggttcagaccatgctcct
gtttatatgagttttggggaagttcctgttattccccaacatagcactccatctttagct
tctagataccttcccatgatttgtggtctccagcaaactcttgtgtctgtgttaatgaga
agagaagttgctaaagaagctaaatcttacgaggccctaagctcacttactacccaaagt
atgaaaatggagagtttcagtgagtgtgctgaaagatcgttcaactgccatgaacctgga
atttcccctggtgaccattgttcttttgcaaaccaagaacctaaaggagaaatgtggaaa
atgcatgagaatcatagagatctacctaatgaagctgtttgcaacaccacaattacagct
gggagttgtaagcagattaatttaattcctagtgacagagccaagaaaaaagcaagaaaa
attcaatcttcgcaactctcactgaggtctttttttcagaagagtccaaaccctaggcat
gatgtggacaatttggttactgatacctcacttcatcaggcagatgtcccagagtcccct
catcgcaaaactcctgtgactgattataataactgtcatgctgagctgcatgatgtgaat
tcgagtggatgctcacaggatcaagatgaacaagatggcaattgttctttggacaaagag
aaaaataatgttgctttacttgaatggcaaagaatacgacaactcatggagaacagtata
cctctttgtaagggccacaaggaaccttgtgttgctcgagtggtgaagaaaccaggtcct
acatttggtcgcagattttatgtttgtgctcgagctgagggacctgcttctaattctgaa
gcaaattgtggttactttaaatgggcttcttcaaaatccaagcacaaaaaatga
DBGET
integrated database retrieval system
