Pistacia vera (pistachio): 116117057
Help
Entry
116117057 CDS
T07386
Name
(RefSeq) uncharacterized protein LOC116117057 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03015
mRNA surveillance pathway
pvy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116117057
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116117057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116117057
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
116117057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
116117057
NCBI-ProteinID:
XP_031258946
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MEEGDQMEQFHRNEAISAVADDGFLGEEDDDFDDLYNDVNVGEGFLQSLKQNEDVLGSEN
DGNNNNKSNSNRNDEEKKLDSAPNIVGTVAESSNSSLPRVSGGNFGNNNIDSRQNLGFSG
PGGMGARSGGGGGGGGGGGLRVELGQSKVMSEVEEQVVSNNNVNSGNNTGGGVGVGVGVQ
GNIVQQNHAGGGGGMGNEGMMRQGGGVVVGGGNGHNIVVGNAGGGGGVGGGLGGGGGGGG
TILFVGDLHWWTTDAELEAELSKYGPVKEVKFFDEKASGKSKGYCQVEFYDPGAATACKE
NMNGHVFNGRPCVVAYASPFSVKKMGEAQVNRNQQMSQANVGQGRRGANDGGVKAGGNNI
ATGGNYQGGDNNRGGYGRGNWGRGNMQGMGNRGPGGPMRNRGPGAVGGRGMMGNGGNGFG
QGIGGAPPLMHPQSMGFDPGFGAPMGRMGSYGGFPGAPTPPFSGVLSSFPPVGGMGLPGV
APHLNPAFFNGRMPMNGMGGMMPASGVEGPNMGMWSDPAMGGWGGEEHGGGRAGESSYGE
EAASDQQYGEVSHERGVWQNSMKEKDRASERDWSGSSERRYRDDREPGYDRDMPREKDMG
HDHDWAERRHREDRDVGRDRDRDRDRDRERSKDRDRDRERDRERERDRYREERERYPDHH
RYRDRETEHDDEWDRGRSSRHSKSRLSQEDEHRSRSRDADYGKRRRLTSE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggggatcagatggagcagtttcatcgcaacgaagcgatctcagccgttgct
gatgatgggtttcttggagaagaggatgacgattttgatgatctgtataatgatgttaat
gtcggtgaagggtttcttcaaagtttgaaacagaacgaggacgttttggggtctgaaaat
gacggtaataataataacaagagtaatagtaaccgtaatgatgaggagaagaaactagat
tcagcgcctaatattgtgggtactgttgcggagagtagtaatagtagcttgcctagggtt
tctgggggaaattttggtaataataatattgatagtaggcagaatttagggtttagtggg
cccggtgggatgggtgcgcgaagtggtggaggaggtgggggtggaggtggaggtgggctt
agggttgaattagggcaaagtaaggtgatgagtgaagttgaagagcaagttgtgagcaat
aacaatgttaatagtggcaataatactggaggtggtgtcggtgttggtgttggtgttcaa
gggaatattgtgcagcaaaatcatgctggcggtggtggtggtatggggaatgagggtatg
atgagacaaggaggtggggtagttgttggtggtggtaatggtcataacattgttgttggg
aatgctggtggtggtggtggtgttggtggtgggttaggaggtggtggtgggggcggtggg
acaatattgtttgtgggagatttgcattggtggacgactgatgccgagttagaagcagag
ttatctaagtatgggccggtgaaggaggtgaagttttttgatgagaaggctagtgggaag
tcaaaggggtattgccaagttgagttttatgacccaggtgcggccactgcttgtaaagag
aatatgaatggacatgtgtttaatgggcggccgtgtgtggtagcatatgcgtcacctttt
agtgttaagaagatgggggaggctcaagttaataggaatcagcagatgtcacaagctaac
gttgggcaaggtaggaggggagcgaatgatggtggagttaaagctggggggaacaatatt
gccactggtgggaattatcaaggtggggacaataatagaggaggttatggaagagggaat
tggggaagaggtaatatgcaagggatgggaaatagagggccaggtggtccaatgaggaat
aggggccctggtgcagtgggtggaagaggtatgatggggaatggtggaaatggatttggg
caaggcattggtggggcccctcctttgatgcatcctcagtcaatgggatttgatccgggg
ttcggtgcacctatgggcaggatgggcagttatgggggttttcccggtgctccaacccct
ccattttcaggagttctatcttccttcccacctgtaggaggtatgggattgcctggtgta
gctcctcatctcaaccctgcattttttaatggccggatgccaatgaatgggatgggtggt
atgatgcctgcaagtggtgttgaggggcctaatatgggaatgtggtcggatcctgctatg
ggaggatggggtggtgaggagcatggtggtggaagagctggagagtctagttatggtgag
gaagctgcttccgaccaacagtatggtgaggtgagtcatgagagaggagtttggcagaat
tccatgaaggaaaaagatcgagcttcagaaagggattggtctggttcctctgagagaagg
tatcgtgatgacagagaacctgggtatgatagggacatgcctagagaaaaagatatgggg
catgatcacgactgggctgagagaaggcatcgtgaggacagggatgttggtcgagacagg
gacagagaccgtgatagagaccgtgaacgttcgaaagatcgtgaccgtgatagggagcga
gatcgagaaagggagcgtgatcggtatagggaggaaagagaaagatatccagatcatcat
aggtacagggaccgtgaaacagagcatgatgatgaatgggacagggggcgatcatcaagg
cacagtaagtcacgtttgtctcaagaggatgaacatcgctcaagatcaagggatgctgat
tatgggaagagacgacggctcacgtccgaatag
DBGET
integrated database retrieval system
