Pistacia vera (pistachio): 116117187
Help
Entry
116117187 CDS
T07386
Name
(RefSeq) F-box protein SKP2B-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116117187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116117187
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116117187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
116117187
NCBI-ProteinID:
XP_031259075
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MVGEATNLRSEELNFCFEKLMMVGGNNSGVVKMKGLAITEWKDIPMELLLRIVSLVDDRT
VIMASGVCSGWRDAICLGLTYLSLSWCKKNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDN
AVEAIANSCHDLQDLDLSKSFKLSDRSLCALALGCPNLIKLNISGCTAFSDHALAYLTEY
CRKLKILNLCGCVKAATDYALQAIGRNCSELQSLNLGWCENVGDVGVMSLAYGCPDLRSL
DLCGCVHITDDSVIALANRCLHLISLGLYYCRNITDRAMYSLAQSRVKNKPEMWEPMKKS
RYDEEGLKSLNISQCTALTPSAVQALCDTFPALHTCSWRHSLVMSGCLNLTSVHCACAIQ
PHPHRTANSIPHPAH
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggttggagaagcaacaaacttgaggagtgaagaactgaacttttgctttgagaagctg
atgatggttggtggtaataatagtggggttgtgaaaatgaaaggtttggccatcactgag
tggaaagatatccccatggagctcttgttgaggatcgtttcacttgttgatgatcggacg
gtcatcatggcttctggggtttgtagtggatggagagatgccatttgtttgggcctcacc
tatctatccctctcttggtgcaagaaaaacatgaacaatttggttctgtctcttgcccca
aaattcacaaaactgcaaactctggtgttgcgtcaagataaaccacaacttgaggataat
gcagttgaagctattgcaaattcttgtcatgatttgcaggacctggaccttagcaaaagc
ttcaagcttagtgatcgatccttgtgtgccttggctctgggttgtcctaatcttattaaa
ctcaacatcagtgggtgtacagctttcagtgatcatgctcttgcatatctcactgagtat
tgtcggaaactaaaaattttaaatctttgtggatgtgtaaaagctgcaactgattatgca
ttgcaggctattgggcgtaactgtagtgagttgcagtctttaaatcttggatggtgtgag
aatgttggggatgtaggagtgatgagtttagcatatggatgcccagatctcagatccctt
gacttgtgtggctgcgttcacataacagatgacagtgtgattgcgttggcaaatcggtgt
ctgcatctgatatcccttggcttgtactattgtcgcaacatcacagacagagcaatgtat
tcgctggcccaaagccgagtgaagaacaaacctgagatgtgggaacccatgaaaaaaagt
aggtatgatgaggaagggcttaagagtctgaatatcagccagtgcacggcgctcacccct
tcagctgttcaagcattatgtgatacatttcctgcactccatacctgctcttggaggcat
tcccttgtcatgagtgggtgtttgaatttgacatctgtgcattgtgcttgtgccatccag
ccacatccacatcgtacagcaaactctattcctcacccagctcattga
DBGET
integrated database retrieval system