Pistacia vera (pistachio): 116117208
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Entry
116117208 CDS
T07386
Name
(RefSeq) homeobox-leucine zipper protein HDG5 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116117208
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
116117208
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Cupin_8
CEP162_coil_mid
HALZ
Motif
Other DBs
NCBI-GeneID:
116117208
NCBI-ProteinID:
XP_031259100
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MFGDCQVISTMGGNIVSTENLFSSQPVVQNQNYNFMPFHPFSPMVSKEENGLLMRSTKEE
MDSGSGSEQAEDKSGNELESNEQQPGQKKKRYHRHTARQIQEMEALFKECPHPDDKQRMR
LSQELGLKPRQVKFWFQNRRTQMKAQQDRTDNAILRAENETLKNENFRLQTELRNVICPN
CGGPAMLGGISFEDFRLENARLREELDRVCCLVSRYSGRPMQTMAPAPSLIPPSLDLDMN
IYSRHFPEPMTTCTDMMPMQMLPETSNFPESGLVLMEEEKSLAMELAISSMDELVKMCRV
NEPLWIRNNENGKEILNLEEHGRMFPWPLNLKQHSTELRTEATRDCAVVIMNSITLVDAF
LDANKWMELFPSIVARAKTVQIIASGVSGASGSLNLMYAELQVLSPLVPTREAYFLRYCQ
QNVEEGTWAIVDFPIDSFHENVQPSFPLYRRRPSGCVIQDMPNGYSRVTWVEHAQIEEKP
VHQIFSHLVYSGMAFGAHRWLGVLQRQCERMASLMARNIADLGVIPSPEARKNLMRLAQR
MIRTFCVNISTCSGQSWTALSDSSIDTVRITTRKITEPGQPNGVILCAVSTTWLPYSHSQ
VFDLLRDERRRSQQLDVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQ
ESCTDQSGSLVVYTTIDVDSIQLAMSGEDPSCVPLLPLGFVIVPVEPIKETTSSEGNSIS
SPEDANIPNSGCLLTVGLQVLASTIPSAKLNLSSVTTINNHLCNTVNQIGAALSNGNNAA
MATNTSYTENNGNLAGSSMEPNGAPKQ
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagattgccaagtgatttcaacgatgggagggaacatagtttcaacagaaaac
ctcttttcatcacagccagtagtacaaaaccaaaactacaacttcatgcctttccatcct
ttttctcccatggtttctaaagaagagaatggattactgatgagaagtaccaaagaagag
atggatagcggatctgggagtgaacaagctgaagacaagtcggggaatgagctagagagt
aatgaacaacaacccggccaaaagaagaaacgctaccacaggcacactgctcgccagatc
caagaaatggaagcgttgtttaaagaatgtccacacccagatgataaacagaggatgaga
ctgagccaagaactcggcctcaagccacggcaagtgaagttttggttccaaaaccggcgt
acccaaatgaaggcgcaacaagaccggaccgataatgcgatacttagagccgaaaatgag
accttaaagaatgagaatttccggctacaaaccgagttgcgcaatgttatatgtcctaac
tgtggaggtccagccatgctagggggcatttcctttgaagactttcggctcgagaacgcc
cgcctcagagaagagttagatcgtgtgtgctgtcttgtttcgcgatacagtggtcgtcca
atgcaaacaatggctccagctccttctctaattcctccttccttggacttggacatgaat
atatattcaaggcattttccggagcctatgactacttgcactgacatgatgcctatgcaa
atgctgcctgaaacttccaattttcctgagagtggtctggtattgatggaagaggagaaa
tctcttgcaatggagctagccatctcatccatggatgaacttgtcaagatgtgccgagta
aacgagcctctgtggattcgtaacaatgaaaatggaaaggaaatcctaaatcttgaagag
catggcaggatgtttccatggcctttgaatctcaaacaacactcaaccgagctcagaacc
gaagccacccgtgattgtgccgtggttataatgaacagcatcactctggtggatgccttt
ctcgatgcaaataaatggatggagttgtttccttccattgttgctagagccaagactgtt
caaattattgcatctggtgtttctggagcaagtggttctcttaacctgatgtacgcagaa
ttgcaagttctttctcctttggttcccactcgagaggcatattttctccgttattgccaa
caaaatgtcgaggaaggaacttgggctattgttgattttcccattgatagcttccatgaa
aacgttcagccttcctttcctctatacaggagacgcccatctggctgtgttattcaagac
atgcccaatggttactcaagggttacatgggtggagcacgcccaaatagaagagaaacct
gttcatcagatattcagtcaccttgtgtacagcggcatggccttcggagcgcatcgctgg
ttgggagtcttacagcggcaatgcgagagaatggccagcctgatggccagaaacattgct
gatctgggagtgataccgtctccagaagcacgaaagaacttgatgagacttgcccagaga
atgataagaacattctgtgtcaacatcagcacttgtagcggccagtcgtggacagctttg
tcggattcctccattgacaccgttagaatcacaacaaggaaaatcacagagcctggtcaa
cctaatggtgtcattctttgtgccgtatcaacaacttggctgccatattctcactcccaa
gtctttgatctcctgagagatgaacgccgcagatctcagcagcttgatgttctttccaat
gggaacgccttacatgaggtggctcatattgctaatggctctcatccaggaaactgcatt
tctcttcttcgaatcaatgttgcgagcaattcatcccagcacgtggagctaatgctgcaa
gagagctgcacagaccagtccggcagccttgtcgtttacacaaccattgacgttgattct
attcagctggcaatgagcggcgaggatccatcctgcgtcccactcctccccttagggttt
gtcatagtcccggtggaacccatcaaggagactacaagcagtgagggcaactcaatctca
tcacctgaagatgccaatatcccaaactcaggatgtctactgacagttggtcttcaagtt
ctcgctagcacaatcccatcagccaaacttaacctctccagtgtcaccacgatcaataac
catttgtgcaacacagtgaaccaaattggcgctgctctcagtaatggcaataacgcagcc
atggccaccaacaccagctacactgagaataatggcaaccttgcaggctctagcatggag
ccgaatggtgcaccgaagcaatag
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