Pistacia vera (pistachio): 116117378
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Entry
116117378 CDS
T07386
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116117378
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116117378
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
116117378
NCBI-ProteinID:
XP_031259276
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MGESGKRYRPRRDYDGDSKNQKRRLNDKDEKGSDDLVVYRILCPDVVIGSVIGKSGKVIN
SIRQETRARVKVVDPFPGAKDRVIIIYCHVKDKEDVEVDDELNDKQPLCAAQDALLRVHA
AISNALANATDTDKKRKDKEECQILVPSSQSANIIGKAGTTIKKLRSKTRTNIKVTAKDA
ADPTHSCAMDFDNFVLISGESEAVKKALFAVSAIMYKFSPREEIPLETTVAEAPPSIIIP
SDVPIYPPGGLYPNADPILPPRSVPSILGGTHVPDLQGYADSGNTWPVYSAALPVISGLG
GASRSEELVIRVLCPFNKIGRVIGKGGGTIKSIRQGSGAQIEVDDTKDNRDECIITVTAI
ESPDDLKSMAVEAVLLLQAKINDEDDDTVTVRFLVSSKVIGCIIGKSGSIINEIRKRTRA
DVRISKGEKPKCADVNDELVEVVGEVSSVRDALVQIVLRLRDDVLKDRDAARNPSVGSDS
MYSGGAGLSVPPLLSSGPPVTQLGYDQRAETGSGLGMLSSSSLYGYGSLPIGESTYGSVS
SYSSKLYGGLPPTSALEILVPANAVGKVMGKGGANLANIRKISGAMIEISDSKSSHGDRV
ALISGNPEQRRSAENLIQAFVMAT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagagtgggaagcgatatcgtccccggagagattatgatggggatagcaagaat
cagaagagacgcctaaatgataaagatgaaaagggtagtgatgatttggttgtttataga
atactttgcccagatgttgttattggaagtgttattggtaaaagtggtaaagttataaat
tcaattaggcaagaaacaagagcaagggtgaaggttgtggacccttttccaggtgctaag
gatagggtaataataatttattgccatgttaaagataaggaggatgttgaagttgatgat
gagttaaatgataaacagcctttgtgtgctgcccaagacgctcttctcagagttcatgct
gcaatttctaatgcactggctaatgccactgatactgataagaaaaggaaagataaggag
gaatgtcaaatacttgttccatctagccaatcagcaaatatcattggtaaggctgggacg
actataaagaaattgaggagtaaaacaaggaccaacattaaggttactgccaaggatgct
gcagacccgactcattcatgtgccatggattttgacaattttgttctgataagtggtgaa
tcagaagctgtgaagaaagcattatttgcagtttctgcaataatgtacaagttttctcct
agggaagagattcctcttgaaacaaccgtggcagaagctcctccaagcattatcattcca
tcagatgtccctatttatccaccaggtggattgtatccaaatgcagatcctattctccct
cctagatccgttccttctatcctaggtggtacacatgtaccagatcttcagggttatgct
gattcagggaatacatggcctgtatattcagcagcccttcctgtaatttctggtcttggt
ggtgcctctcgatctgaggagttagtcataagagttttgtgtccctttaacaagattggc
cgtgtcattgggaagggagggggtaccatcaaaagtataaggcagggtagtggtgctcaa
attgaggttgatgacactaaggacaatcgtgatgaatgtatcattacggtcactgcaatt
gagtcacctgatgatttaaaatccatggctgttgaagctgttctcctgctgcaagcaaaa
ataaatgacgaagatgacgacaccgttactgtccgattccttgtttcttcaaaagttatt
ggctgtataattggaaagagtggttcaataataaatgaaattcggaagaggaccagagct
gatgtccgaatttccaaaggggaaaaacctaaatgtgctgacgtaaatgatgagcttgta
gaggtggttggagaagttagtagtgtgagagatgctcttgttcagattgttttaagactt
cgtgatgatgtcttgaaagacagggatgctgctcgtaacccttctgtcggctctgattct
atgtactcaggtggcgcagggctttcggtgcctcctctcttgtcatctggtcccccagtc
actcaattgggttatgatcagagggctgaaactggaagtggcctaggcatgctttcctct
agcagcctctatggatatggatcattgccgattggtgagagtacatatggatccgtgtcc
tcgtattcatccaagctttatggagggttgccgcctacctcagctcttgagatattggtt
cctgctaatgcagtgggtaaagtgatgggcaaaggaggggcaaatttagctaacattcgg
aagatatcaggagcaatgatagaaatttctgattccaaatcttcccatggtgatcgtgtt
gctctaatttctggtaatcctgagcagagacgttcagctgaaaacttgattcaggcattt
gtaatggccacatga
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