Pistacia vera (pistachio): 116117482
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Entry
116117482 CDS
T07386
Name
(RefSeq) actin-interacting protein 1-2-like
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvy04990
]
116117482
Domain-containing proteins not elsewhere classified [BR:
pvy04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
116117482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_SCAP
Beta-prop_ELP1_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
116117482
NCBI-ProteinID:
XP_031259365
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MPPQLAETYACVPSTERGRGILISGHPTSDSILYTNGRSVIILDLENPLQVSIYGEHAYP
ATVARFSPNGEWIASADTSGTVRIWGARDEHVLKKEFRVLSGRIDDLQWSPDGMRIVACG
DGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFK
FKLSYSDHSNFVNCVRFSPDGSKFISVSSDKKGIIFDGKTGGKIGELSSEDGHKGSIYAV
SWSPDGKQVLTVSADKSAKIWEISDDNHGKVKKTLTPPGSGGVDDMLVGCLWQNDYLVTV
SLGGTISIFSASDLEKSLRQLSGHMKNATSLAVLNSDPKVILTSSYDGLIVKWIQGVGYS
GKLQRKENSQIKCLAAVEDEIVTSGFDNKIWRVSLQGDQCGDANSIDIGSQPKDLSLALL
SPELALVTTDYGVVMLRGAKVVSTINLGFDMTASAVAPDGSEAIIGGQDGKLHIYSITGD
TLVEEAVLEKHRGAVSVIRYSPDLSMFASGDLNREAIVWDRVSREVKLKNMLYHTARINC
LAWSPDNNMVATGSLDTCVIIYEVDKPASCRMTIKGAHLGGVYGLAFTDDHTLVSSGEDA
CIRVWRVTLQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcccccacagctagctgaaacctacgcgtgcgtgccgtcgacggagcgtggccgagga
attttgatctccggccacccgacttccgattccattctctacaccaatgggagatcagta
attattcttgatcttgaaaaccccttacaggtctcgatctacggcgaacatgcatatccg
gccaccgtggcgcggttctcgcccaacggagagtggatcgcatccgccgacacgtcgggg
accgtgcggatctggggggcccgtgacgagcacgtgttgaagaaggagtttcgggttttg
tcgggccggatcgacgacctccagtggtctcccgacgggatgaggatcgttgcttgtggc
gatgggaaggggaaatcgcttgttcgcgctttcatgtgggattctggcactaatgtagga
gaatttgatggccattcaagacgtgttcttagttgtgctttcaagccaacaagaccattt
cgcattgtaacatgtggagaagattttttggtgaatttctatgaaggaccaccatttaaa
ttcaaattatcttacagtgatcattcgaattttgtcaattgcgttaggttttctcctgat
ggcagcaagtttattagtgtaagctctgacaaaaagggtataatatttgatggaaagact
gggggtaagattggagagttgtcctctgaagatggtcataaaggcagcatttatgctgtc
agctggagtcctgatggtaaacaggtgctgacagtgtctgctgacaagtcagcaaaaata
tgggagatctctgatgataatcatggaaaggtaaagaaaacattgactcctcctggctcc
ggtggagtggatgacatgctagtcggatgcctttggcagaatgattatcttgtcactgtt
tctcttggtggcacaatcagtatattttcagcaagtgatcttgagaagagcctgcggcaa
ttatctggacacatgaaaaatgctacttcattggctgtgcttaacagtgacccaaaagtt
atattgactagtagttatgatgggttaattgttaaatggattcaaggagttggatatagt
ggtaaattgcagaggaaagagaattctcaaatcaaatgtctagctgctgttgaagacgag
attgttacatctggatttgacaacaagatatggagagtttctctacaaggggatcagtgt
ggagatgcaaattccattgatattggcagtcagccaaaagacttaagccttgcccttctc
tcccctgaacttgctttggtcacgactgattatggagttgttatgcttcgtggtgcaaaa
gtagtgtcaaccattaaccttggttttgatatgacagcttctgctgttgcacctgatgga
agtgaggccattataggtggacaagatggtaaactgcacatatactcaattacaggagat
acgcttgtagaggaggctgtccttgagaaacaccggggggctgttagtgtcatacgctac
tctcctgatctttcaatgtttgcgtcaggtgatctaaatcgagaagccatagtctgggat
cgtgtctctcgagaggtgaagcttaagaacatgttataccacactgcacgcatcaactgt
cttgcttggtctcctgataacaatatggttgcgactggatctcttgatacctgtgttata
atatatgaagttgacaagccagcatcctgccgtatgactataaagggtgctcatttaggt
ggggtttatggtttagctttcactgatgaccacactttggttagttctggtgaggatgct
tgtatccgtgtttggagggtgaccctacaataa
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