Pistacia vera (pistachio): 116117614
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Entry
116117614 CDS
T07386
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116117614
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvy01009
]
116117614
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116117614
Protein phosphatases and associated proteins [BR:
pvy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116117614
Spliceosome [BR:
pvy03041
]
Common components
Common spliceosomal components
SR proteins
116117614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116117614
NCBI-ProteinID:
XP_031259495
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MSYSREGRSASPRASVSPVRGRRSRSLSRSRRSRSRSRSRDFVEATNPGNNLYVTGLSTR
VTSSDLEKFFNSEGKVTECHLVTDPRTRESRGFAFVTMETVEDADRCIKYLNRTVLEGRL
VTVEKAKRSRGRTPTPGRYHGLRERRGPGRRRSRSYSPHRYDRDPYPRERRGRSRSPYGR
GRSPSPHGRGRSRSPYERRRDYYSDTYKRRRERSLSASGSGYPR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcatattcaagggaaggaaggtctgcttcgccacgtgcctctgtttcacctgttcgg
ggtcggaggtcgaggtcattatctaggtccaggcgaagtcgctcaaggtctaggagccgt
gattttgttgaggcaacaaatccaggaaataacttgtatgtgacaggcttatccacaagg
gtgacaagttctgatcttgagaagttttttaacagtgaagggaaggttactgaatgccat
ttggtcacagatcctcgtaccagagaatctcgtggttttgcttttgttacgatggaaact
gttgaggatgcagaccgttgtatcaagtatttgaaccgtacagtgcttgaaggtcgatta
gtcactgtggaaaaggcaaaaaggtctcgtggcagaacacctactcctggcaggtatcat
ggcttgagagagagacgaggacctggtcgcagacgttctcgtagctactcacctcataga
tatgacagagatccttatccaagggaacgacggggaagatcacgctccccatacggtaga
ggtagatcgccttccccacatggtagaggtagatcgcgttccccatatgagaggaggaga
gactattattctgacacatataagagacgcagagaacgctcattgtctgctagtggcagt
ggctaccctagatag
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