Pistacia vera (pistachio): 116117617
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Entry
116117617 CDS
T07386
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116117617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116117617
Spliceosome [BR:
pvy03041
]
Common components
Common spliceosomal components
SR proteins
116117617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNA_bind
Nup35_RRM_2
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
116117617
NCBI-ProteinID:
XP_031259501
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MMRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMEDERDAEDAIRGLDRTE
FGRKGRRLRVEWTKHERGIRRPGGGSRRPSSNTRPSKTLFVINFDPYHTRTRDLERHFEP
YGKIVSVRIRRNFAFVQYEAQEDATRALETTNMSKLMDRVISVEYAVRDDDDRRNGHSPD
RSRDRSPDRGRRRSPSPYRRERGSPDYGRGSSRSPYRRERASPDYGRVRSPSPYRRDRRS
PDYGRGTSRSPYKKESGADHGRGPSRSPYRRERGSPENGHGSSRSPYRREKPSPDNVRGP
SRSPYGRERSSPDNGRQGSGSPYGREGSPDNGRGPSPNSMPEARDSPNYGGADSPDNDRY
RSRSPPADD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcctatattctgtggaaactttgagtatgatgcgcgccaatctgatctggaa
cgacttttcagaagatatggcaaagttgatagagtggatatgaagtctgggtttgctttt
atttatatggaagatgagagagatgcagaagatgccattcgagggcttgatcggactgag
tttggacgcaagggtcgcagacttcgtgttgaatggacaaagcatgaacgtggtattaga
agaccaggcggcggttcaagaagaccttcttcaaatacaagaccatcaaagaccttgttt
gtcatcaattttgatccataccatacccggactagggacttggaaaggcactttgagcca
tatggaaagatagtaagtgtaaggatcagaaggaattttgcatttgttcaatatgaagca
caggaggatgccaccagagcattggaaactacaaatatgagcaagttgatggaccgagtt
atttcagttgagtatgcagttcgtgatgatgatgatcggaggaatggacatagtcctgat
aggagtcgcgacaggtcacctgataggggcagaaggagatccccaagcccttaccgaaga
gaaaggggaagccctgattatggtcgtggctctagccgcagtccttatcggagagaaagg
gcaagccctgattatggtcgtgttcgcagcccaagtccctataggagagatcgtcgcagc
cctgattatggacggggtactagccgtagtccttataaaaaagagagtggtgctgatcat
ggccgtggccctagccgtagtccttaccgaagagagagaggtagccctgaaaatggccat
ggatctagtcgcagtccatatcggagagagaagccaagccctgacaatgttcgtggaccc
agccgcagtccatatggaagagagaggtctagtcctgacaatggtcgtcaaggcagtgga
agtccctatggaagagaaggtagccctgacaatggtcgtggccctagcccaaattctatg
cctgaagctagggacagccccaattatggtggagctgatagccccgacaatgacagatac
cgcagtcgctcacccccggccgatgactga
DBGET
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