Pistacia vera (pistachio): 116117820
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Entry
116117820 CDS
T07386
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116117820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116117820
03110 Chaperones and folding catalysts [BR:
pvy03110
]
116117820
03029 Mitochondrial biogenesis [BR:
pvy03029
]
116117820
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvy04147
]
116117820
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
116117820
Messenger RNA biogenesis [BR:
pvy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
116117820
Chaperones and folding catalysts [BR:
pvy03110
]
Heat shock proteins
HSP60 / Chaperonin
116117820
Mitochondrial biogenesis [BR:
pvy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
116117820
Exosome [BR:
pvy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116117820
Exosomal proteins of other body fluids (saliva and urine)
116117820
Exosomal proteins of breast cancer cells
116117820
Exosomal proteins of colorectal cancer cells
116117820
Exosomal proteins of bladder cancer cells
116117820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
116117820
NCBI-ProteinID:
XP_031259687
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MASANALSSASIFCSPKQGSLGRRQQSNNQRVNYRRFSVRAAAKEIAFDQNSRAAMQAGI
DKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT
NDTAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQGLVQELERKARPVKGR
EDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYIS
PQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALAT
LVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQATDLGLLIENTSVEQLGIAR
KITITKDSTTIIADAASKDELQARISQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKV
GAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSSHVLTIKDKLEDAEERLG
ADIVQKALVSPASLIAQNAGVEGEVVVEKLKSSEWEIGYNAMTDKYENLLEAGVIDPAKV
TRCALQNAASVAGMVLTTQAIVVEKPKPRTPAAAPPQGLAI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgctaatgctctatcttcagcttctattttctgctctcccaaacagggaagt
ttggggagaagacaacagagtaataaccagagagtaaattatagaaggttttctgttcga
gcagctgcaaaagagattgcctttgaccagaattccagagctgcaatgcaggccggcatt
gataagctttcagatgctgttggtttgactctcggtcccagagggaggaacgttgttctg
gatgagtttgggagtcctaaggtagttaatgatggcgtaacaatagcccgagcaattgaa
ttagccgatcccatggaaaatgctggagccgctcttattagggaggttgcgagtaaaaca
aatgacactgctggtgatgggacaacaactgcctcagtacttgcacgggaaattattaaa
ctgggacttttgagtgtcacctctggtgcaaatccagtgtcagtgaagaaagggattgat
aaaaccgtacaagggttggtacaagagcttgagaggaaggctaggcctgtaaaaggtcgt
gaagatattaaagccgttgctaccatttctgctgggaatgatgagcttattgggacaatg
attgctgatgcaattgacaaggttgggcctgatggtgtcttgtctatcgaatcatcatcc
tcatttgagactactgtggaagttgaggaaggaatggagattgacagaggttacatttcc
cctcagtttgtcaccaacccagagaagttaattgttgaatttgagaatgcgagagtgttg
atcacagatcaaaaaatttctgctataaaggatattattcccttgttagagaagaccaca
caattaagagctcctttgctcataattgctgaggacgtcactggtgaggctctggccaca
cttgttgtgaacaagctacgaggtatccttaatgttgctgctattaaagctcctggtttc
ggtgagcgaagaaaagctcttcttcaagatattgccattttgactggagctgagtttcaa
gctactgatttgggcttgctcatcgagaacacctcagttgagcagctaggtatagctaga
aagattaccattaccaaggactcaaccaccattattgctgatgctgcatcaaaggatgag
ttacaagcaagaatttctcagctgaagaaagagttggctgagacagattctgtatatgac
tcagagaaactagctgagagaattgccaaattgtctggtggagttgctgttattaaagtg
ggagctgcaacagaaactgagcttgaggaccgtaagctccgtattgaagatgctaagaat
gcaacttttgctgccatagaggaagggattgtgcctggtggtggtgctgcactggttcac
ctctcttctcatgttcttacaattaaggataagcttgaggatgctgaggagcggttaggt
gctgacattgtgcagaaggcactggtgtcacctgcatcactgatagcacagaatgctgga
gttgagggtgaggttgtagtggagaagttgaaaagcagtgaatgggagattggttacaat
gccatgacggacaagtatgagaacctgcttgaagctggagttattgacccggcaaaggtg
acaagatgtgcattacagaatgcagcatcagtggcaggaatggtcctcaccacccaggct
attgttgtggaaaaaccaaagcccagaactccagcggcggctcccccacaaggccttgcc
atatga
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integrated database retrieval system
