Pistacia vera (pistachio): 116117974
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Entry
116117974 CDS
T07386
Name
(RefSeq) homeobox-leucine zipper protein ROC8-like
KO
K09338
homeobox-leucine zipper protein
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116117974
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
116117974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Motif
Other DBs
NCBI-GeneID:
116117974
NCBI-ProteinID:
XP_031259813
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MDFVMGSGGNSGFSRRVLIPMTITASIRQELGLILSRLSFGFKIRELKQRWFRMRKLITQ
FSGQKMKESKLKTQLSGESPKTVICPSCGGPPCGEEERQLCLQNLHLDNARLKEEHEKLS
NLLAKFIGKPIPHIDAFNPIPGSTFGASLQPNFQNQAMGRANLDLDPGSGPLDNISLPFQ
FKGITDVEKTIMVETATNGMDELIRLLRIDEPLWNKSLTDGTYVINRDSYEKICIRASHF
NSSSARFESSKDSRIVNMNAMQLIDKFLDSDKWVDTFPTIVTEARTIQVLEEGMPGNRSG
CLQLMYEQMHILSPLVAPREYYFLRHCQQIEQGLWVMVDVSCDWPPQENISPSRCWRLPS
GCMIQEMPNGCSNVTWVEHVEVDDKSQTHRLYRDLICSSSAYGAERWVVTLQRICERLSF
SMDETLPTHELGGVINSPEGRKSIMKLGHRMVKNFCGILNMSSKLDFPQLSEVNNSGVRV
AVRQNIQEGQPSGTVVSAATSLWLPLPTQNIFNFFKDPKMRVHWDTLSNGNPANEIAHIS
NGAHPGNYTSIIRPFVPTENNMLMLQESYIDVLGSMIVYAPIDIPSVNLAISGKDSSDIA
ILPSGFIISGDGRPDNNNGASTSSNSGSPAGSSAGGSLLTVALQILVSSSKEVNVESVAT
VNTLISSTVQRIKATLNCCNLD
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtgatgggaagtggtggtaattccggtttttcaaggagggtcctcatcccg
atgacaataacggcgtcaattaggcaggaattgggtctgatcctaagcagattaagtttt
ggtttcaaaataagagaactcaaacaaaggtggttcagaatgagaaagctgataactcag
ttctccgggcagaaaatgaaagaatccaagctgaaaactcagctatcaggggagagccct
aagactgtgatttgcccatcatgcggtggacctccctgtggagaagaagaacgtcaactt
tgcctacagaatttgcatttggacaatgctcgcttgaaagaagagcatgaaaagttatcc
aaccttcttgcaaaattcataggcaaaccaattccacatattgatgcatttaaccctatt
cctggatcaacatttggtgcttcattgcaaccaaattttcagaatcaagcaatggggaga
gctaatctcgatcttgatcctggttcggggccactggacaacatttcgttaccttttcaa
tttaaaggaatcacagatgtggagaagacaatcatggtagagactgctactaatggaatg
gatgaattgattaggcttcttcgaatcgatgaacccttgtggaacaagtccttaacggac
ggaacatatgttattaatcgagatagttatgagaagatatgcattagggctagtcacttc
aacagttcaagtgctcgctttgagtcatcaaaggattcaaggatagtgaatatgaatgca
atgcaattgattgacaagtttttagattcggataaatgggtggatacatttccaacaatt
gttacagaagcaaggacgattcaagttcttgaagaaggaatgccaggaaataggagcggt
tgcttgcaattgatgtatgagcaaatgcacattctgtctcccttggtggcacctcgagag
tactatttccttcgccattgccagcaaattgaacaagggctatgggtcatggtggatgta
tcttgtgattggccaccccaagaaaatatttcaccttctcgttgttggaggcttccttct
ggttgcatgattcaagaaatgcctaatggatgttccaatgtaacttgggtagaacatgtg
gaagttgatgataaaagccaaactcatcggctttatagagatctcatttgcagtagttct
gcctatggagcagaaaggtgggttgttactcttcagaggatatgtgaaagactatctttc
tccatggatgaaaccttacctactcatgaacttggaggagtgataaactcgcctgaaggt
agaaagagcataatgaagctagggcacagaatggtgaagaatttttgtggaattttaaac
atgtcaagcaaactagatttccctcagttatctgaagtaaacaatagtggcgttagagtg
gctgttcgccaaaacatacaagaaggccagcccagtggaaccgttgtcagcgcggctacc
tctctctggcttccactccctactcagaatatcttcaattttttcaaagatcctaaaatg
cgagttcattgggacactctttcaaatggaaatcctgcaaatgagattgcacatatctca
aatggtgctcacccggggaactatacttccattataaggccgttcgtcccaactgagaac
aacatgttaatgcttcaagagagttacatagatgtgttagggtcgatgattgtgtatgct
ccgatagacataccatcagtgaaccttgctataagcggaaaggattcttcagatattgca
atacttccatctggttttataatctctggtgatgggcgtccagataacaacaatggagct
tcaactagttcaaactctggaagccccgctggttccagtgctggtggttcacttctcaca
gtggctcttcagatattggtttcatcttcaaaggaggtcaacgtggaatctgtggccacc
gtcaacacccttatcagctccactgttcagaggataaaggccactttgaattgctgtaat
ttggattga
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