Pistacia vera (pistachio): 116118126
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Entry
116118126 CDS
T07386
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03440
Homologous recombination
pvy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116118126
03460 Fanconi anemia pathway
116118126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvy03032
]
116118126
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116118126
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116118126
DNA replication proteins [BR:
pvy03032
]
Eukaryotic type
DNA Topoisomerases
116118126
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116118126
FA (Fanconi anemia) pathway
116118126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
116118126
NCBI-ProteinID:
XP_031259954
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MSGVGRTINVLNVAEKPSVAKSVAGILSRNQGLRVREGRSRYNKIFEFNYAIRGQSCHML
MTSVTGHLMELEFEDRYRKWHSCDPADLYEAPVRKFVPEEKKDIKRTLEEEARRCQWLVL
WLDCDREGENIAFEVIDVCRAVNSHLVIRRARFSALIDREIHQAVQNLVDPNEWFSDAVD
ARQEIDLRIGASFTRFQTMLLKDKFHIDSATGDRNLVLSYGPCQFPTLGFVVERYWEIQS
HEPEEFWIINCSHRSDEGTASFSWMRGHLFDYTSAVIIYEMCVQEPTATVTKVRQQEKLK
YPPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSSRTDLHTIVQ
EQQGHPVWGSYAQRLLDPEAGLWRNPGSGGHDDKAHPPIHPTKFSAGESGWSQDHHRLYE
LVVRHFLACVSQPAVGAETIVEIDIAGEQFSACGRMILAKNYLDVYRFESWGGSMIPAYA
HGQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDA
NTRFSPTNLVTDLA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgtaggccgtacaatcaacgtcctcaacgtggcggagaagccttcagtggcg
aagtcggtggccggaatcctctcgcgaaaccagggccttagagtgcgcgagggacggtcg
cgctacaacaagatattcgagttcaattacgcgattcgtggacaatcctgtcacatgctc
atgacctccgttactggacaccttatggagcttgagttcgaggatcgttaccgtaagtgg
cactcttgtgaccccgctgatctctacgaagcgcccgttcggaaatttgtccccgaggag
aagaaggatatcaagaggacattggaggaggaagcaaggaggtgtcagtggctagtttta
tggcttgattgtgatagagaaggagaaaacatagcatttgaggtgattgatgtttgtaga
gcggtgaattctcatcttgttatacgaagggctcggttctctgcattgattgacagggaa
atccatcaggcagtgcagaatcttgttgatcctaatgagtggttttctgatgctgtggat
gctaggcaagaaatcgatctccggattggtgcttcttttaccaggtttcagactatgctt
ttgaaagataagtttcatattgattcagctactggtgacagaaatcttgttctaagttat
ggtccttgccagtttccaacacttggctttgttgtggaacgctattgggagatacaatca
catgaaccggaagagttttggataatcaactgttctcacagatcagatgaaggcactgct
tctttcagttggatgcgtggacatttatttgattatactagtgcagtcataatttatgaa
atgtgtgttcaggagcctactgcaactgtcacaaaggttagacaacaggagaagttgaag
tatcctccataccctttgagtaccattgaactagagaaacgtgcttcgcgatactttcgg
atgagttctgaacataccatgaaggtggccgaagatttatatcaagctggttttatcagc
tatcctcgtacagagacggacagcttttctagtaggactgatttgcatacaattgtgcaa
gaacaacaagggcatcctgtgtggggatcatatgctcaacgcttgttggaccctgaggca
ggtctgtggagaaatcctggtagtggtggacatgatgacaaggcccatccacccattcac
ccaacaaaattttctgctggggaatctggatggagtcaagatcaccatagattgtatgag
ttggttgttcgccattttctggcttgtgtatcacagccagctgtgggggctgaaactatt
gttgaaatagatattgctggtgagcaattttctgcatgcgggagaatgatattagctaaa
aattacttagatgtttatcgctttgaatcatggggaggttcaatgatcccggcttatgcc
catggacaacagttcatcccaacaacattgactcttgattcaggagtcactagaccaccg
cctcttttaagtgaagctgatttactaagttgtatggacaaggcgggcattggaacagat
gcgacaatgcatgatcacataaagaagctgcttgataggttttatgcaacaaaggatgca
aatacacgcttctcaccaactaatcttgtaactgatttggcttga
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