Pistacia vera (pistachio): 116118204
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Entry
116118204 CDS
T07386
Name
(RefSeq) uncharacterized protein LOC116118204
KO
K14311
nuclear pore complex protein Nup188
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116118204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116118204
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116118204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1152
Motif
Other DBs
NCBI-GeneID:
116118204
NCBI-ProteinID:
XP_031260037
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MEIEGLQLAIVSVLNVLYIMLSKFSKEMPSSVPIFHQALLSSTTSPVPVVAAVTSLISYF
RNPAIQVGAARVLSMLLTISDLSQLNFSANACFGLDDKQIADLRHSVDCMLQSVENEDQF
VASVNLLTAAARYQPALLIALFCTKENTDVQPSNGNGVKHPANEASSGLLGSKKSSLVDA
LLQYVERSDDLINSNPCILLNVLNFLKALWQGAGQYTNILEWLKGCGKYWKQLANSFSPI
AKLQSLKLEKMTEKEALSLAYKYRCQSTVLEIMAHDLFLKKKLLHVESLLKHATETNGGL
ESAASAELSKPVNDSDLKDILSSWCKSSVLGSLIKSYTSCAYDNEILFHAKVAMSLLTVL
MIEKLATGDTGSLSVSLLEKVRIMSKKLTSHNAFTQLLVQYSQHRYSEGKELKTLILSDL
YCHLQGELEGRKTSPGPFRELSQYLIESKFWQSYEHKYDGDLLATAKDLYMFDLDCIRVD
LGLDIWDYSEWKSSKVIAGTMLHCMQDANLMLLLATSKHSALRALVTVLTVYEDNSLEKG
TEIGGRIPDQLISCIEPICQSFRSTLELLAPTLDAPGDILDFLAAQAELLLHLVRSVGKS
LPSSVCVLVLKACSSGLKVLCDLRKSVTGVKITMKHLLMVLLSSLEVTYHNSCLDAVKDT
ESVEDVAEVSNVTLGLLPILCHCITSAEHCTLSLTNVDLIIRSFLAPSTWFPIIQQHLQL
QLVIQMLQVKSSFACIPVTLKFFLTLAQIRGGAEMLLNAGFFSSLRVLFADLLDRPASVV
KHDKSYLDVTDKAEKLQWIWGLGLAVVAAVVHSLGESLSVDILDSVIPYFFQERAYLISY
YLNAPEFPSFHDKKRPRAQRTQTSLTSLKETENTLMLMCVLAKQWSSWVKAMKEMDSQLR
ETSIHLLAFISRGTHRLGGSSGRTVPLICPPVLKEELDWCKKPSVVNSKNGWFALTPLGS
VSKTKSTVVSTTTALVIRDQATESSDPASQTYFSDAVAIQMYRITFLVLKFLCLQADGAA
KRAEEVGFVDLAHFPELPMPEILHGLQDQAVAIVTELCEANKLKQIHPEIHHVCLLLLQI
MEMALNLELCVLQICGIRPVLGRVEDISKSVKLLIQATEGHAFLKTSMKSLKQIISIVYP
GLL
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaaggattacaacttgctatagtttctgttttgaacgttctgtatatcatg
ctctcgaagttctcaaaggaaatgccttccagcgttcccatctttcaccaagctttgctg
tcatccacaacctcaccagttcctgttgttgcagctgttacatccttgatttcatatttt
cgcaatcctgctattcaggttggcgctgccagagtactttccatgttgttgactatatca
gatctttcccaactgaatttttctgccaatgcatgctttggtttagatgacaagcagatt
gcagatttaaggcattctgttgattgcatgctacagtcagtagaaaatgaagatcaattt
gttgcttcagtaaatctgcttactgctgcagcacgatatcagcctgctttacttattgct
ttattttgtacaaaagagaatactgatgtccaaccaagtaatggcaatggcgtgaagcat
ccagcaaatgaagcgtcctcagggctgctagggtccaaaaagtcaagtctggttgatgca
cttctgcaatatgttgaacgatctgatgatcttatcaatagtaatccttgcatattgctg
aatgttcttaacttcctgaaggcgttatggcaaggggctggtcagtacacaaacatattg
gagtggttgaaaggttgtggaaagtactggaaacaactggccaactcattttctccaatt
gctaaattgcaatctctgaaacttgaaaaaatgacagaaaaggaggctttgagtttggcg
tataaatatcgatgtcaatctactgtcttggaaataatggcacatgatttgttcctgaag
aaaaagctgttacatgttgagtcacttttaaaacatgccactgaaacaaacgggggatta
gaaagtgctgcaagtgctgaactgtctaaacctgtgaatgatagtgatcttaaggatatc
ttgtcaagttggtgtaagagctctgttttgggtagcttgatcaagtcatatacttcttgt
gcatatgacaatgagatactttttcatgcaaaggttgctatgagtttactcactgtgctt
atgatagaaaaattggcaactggtgatactggaagtttgtctgtttcgttacttgagaag
gtccgcattatgtctaaaaagctgacaagtcataatgcttttactcaattgctggtgcaa
tactcccagcaccgctacagtgaaggaaaagaattaaagactttgatactcagtgatctt
tactgtcatctgcaaggagagcttgaaggtcgtaaaacaagtccaggaccgtttagagaa
ctttcccaatatctaattgaatctaagttctggcaatcttatgaacataagtatgatggt
gacctacttgcaactgccaaagacctgtatatgtttgatcttgactgcataagagtagat
ttgggtttggacatatgggattattcagagtggaaatcctctaaagtaattgctggcaca
atgttgcattgcatgcaagacgcaaacttgatgctgttgcttgcaacttcaaagcattct
gcactgagagcattagtaactgttttgactgtgtacgaagataactcactggagaagggg
actgaaattggtgggaggatccctgatcaactaatttcatgcattgagcccatatgccaa
agtttccgctccaccttagaactgttagctccaactttggatgcccctggagatatcctt
gatttccttgcagcacaagcagaattacttcttcatctcgtgagatctgtagggaaaagc
cttccttcatctgtttgtgttcttgttttgaaagcctgcagttctggccttaaagtgctg
tgtgacttgaggaaatcagttactggggtaaaaataacgatgaagcatttgctcatggtt
cttctttcgtcgctggaagttacttaccataattcatgtttagatgcagtgaaagatacg
gaatctgttgaagatgttgctgaggtttccaatgtgaccttgggtttattacctattctc
tgtcattgcatcactagtgctgagcactgtaccctctccctgaccaatgtggacttaata
attagaagttttctagcccctagcacttggttccccatcatacagcaacatctacagttg
cagcttgttattcagatgcttcaggtcaagtcatcgtttgcctgcattcctgtaacattg
aaattctttctaacattggcacagattagaggaggtgctgagatgcttcttaatgctgga
tttttctcatctctaagagttttgtttgctgatctattggataggcctgcctcagtggtt
aagcatgataagagttatctagatgtaacagacaaagctgaaaaactgcaatggatttgg
ggacttggcttggctgtggttgcagctgtggttcattctttaggagagagtctttccgta
gacatattggacagtgtgataccttacttctttcaagagagagcttatctgatttcttac
tatctgaatgcaccagagtttccatcatttcatgacaagaaaagacctcgtgcacaaagg
acacaaacttctctgacttctcttaaagaaacagagaatactctcatgctgatgtgtgtg
cttgcaaaacagtggagttcatgggttaaggccatgaaagaaatggattcacaactgagg
gagacaagtatccatcttttagcctttattagccgaggaactcatcgccttggaggatct
tctggcagaactgttcctctcatatgccctcctgttctcaaagaggagttagattggtgc
aagaaaccatcagttgtcaacagcaaaaatggatggtttgctcttacacctcttggttct
gtgtcaaagacaaagtccactgtcgtgtcaaccacaactgctcttgtaatcagggatcaa
gctaccgaaagcagtgatcctgcttctcaaacgtacttctcagatgctgttgctattcag
atgtatagaattacatttcttgttttgaaatttctttgtttacaagctgatggggctgct
aaaagggcagaggaggtgggttttgttgatcttgctcactttcccgagcttccgatgcct
gagattttacatggcttgcaggatcaagcagttgcaattgttactgaattgtgtgaggca
aacaaattgaagcagattcatcccgaaattcatcatgtctgtcttttactgcttcaaata
atggaaatggccttgaacttggaactttgcgttctacagatttgtgggataaggcctgtc
ttaggacgtgtggaggacatctcgaagtcagtcaaattgttgatacaagcaacggaagga
catgcttttctgaaaacatcaatgaagtcgttgaaacagataatatcaattgtctatcct
ggattgctgtga
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