KEGG   Pistacia vera (pistachio): 116118272
Entry
116118272         CDS       T07386                                 
Name
(RefSeq) splicing factor SF3a60 homolog isoform X1
  KO
K12827  splicing factor 3A subunit 3
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116118272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvy03041]
    116118272
Spliceosome [BR:pvy03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116118272
 Complex B
    116118272
 Complex C
   U2 SnRNP specific factors
    116118272
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd LLPH Desulfoferrod_N
Other DBs
NCBI-GeneID: 116118272
NCBI-ProteinID: XP_031260104
LinkDB
Position
Unknown
AA seq 510 aa
MSSTLLEVTRAAHEEVERLERLVVKDLQTEPTSNKGRLFQTHRVRNMIDTITATTEKLVE
IYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDANEEYENLL
KEEPLIEFSGEEAFGRFLDLHELFNQYINSKFGEHIEYSAYLDVFSQPLKIPRKMKMTRQ
YREYMENLLEYLIYFFQRTEPLQDLDRIFSKVEADFEEQWANGMIPGWDNEDQENGHVPS
EHTVIDLDYYSTVEELMEVGPEKLKEALAALGLKSGGTVQQRAERLFLTKHTPLEKLDKK
HFAKGSRGPEKNGVAAPPQEVGNLKDIALMEAKMQKLCDLLEETIERTKQNVEKKQALTY
EEMEAEREEQEETQVDTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKDLWKKIQERQGVNKW
RPDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctactggaggtgactcgcgcggctcacgaggaagtggagcggctggaa
cggcttgtagtgaaggatctacagaccgagcctacctccaacaagggccgcttgtttcag
actcaccgcgtccgtaacatgatcgatacaatcaccgccactaccgaaaaactcgttgag
atttatgaagataaagataatgcgaggaaggatgagattgcagctcttggaggccaaact
gcgacaggaacaaatgtgtttagtgcattttacgatagattgaaagagattcgtgagtac
cataggaggcatccggctgcacgtgttgttgatgctaatgaggaatatgaaaatctgcta
aaagaggaaccgctaattgagttcagtggagaggaagcctttggacggttcctagacttg
catgaactgttcaatcagtacattaactctaagtttggagaacacattgaatactctgct
taccttgatgttttctcacagccacttaagatcccccgcaagatgaagatgactaggcag
tacagggaatatatggaaaatctgctggagtatttaatttacttttttcagcggacagaa
ccactgcaagatctggatagaatattttcaaaggttgaggctgattttgaagagcaatgg
gccaatggcatgataccgggatgggataatgaggatcaagaaaatgggcatgttccttct
gagcatactgtaatagatcttgattattacagcactgttgaagagctaatggaagtgggt
cctgaaaagttgaaggaggcattggctgctttaggactgaagagtggtggtactgtacaa
cagcgcgcagagaggcttttccttacgaagcatactcctctggagaagttggacaagaaa
cattttgctaaaggttcacgtggcccagaaaaaaatggagttgctgcaccaccacaagaa
gttggcaatttaaaagacattgccttgatggaggctaaaatgcaaaaactgtgtgactta
ctggaagagacaattgagcgaacaaaacaaaatgttgagaagaaacaagctttgacatat
gaggaaatggaagcagaacgtgaggaacaggaggagacacaagttgacactgaaagtgat
gatgaagagcagcagatttacaatcccctgaaattgccaatgggttgggatgggaaacct
ataccttattggctgtacaagcttcatggtctgggacaggaatttaagtgtgagatatgt
gggaactacagctactgggggcgtagagcctttgagcggcacttcaaggaatggcgccat
caacatgggatgcgttgccttggtattccaaacaccaagaactttaatgaaatcacatca
attgaggaagccaaagatctgtggaagaaaatacaagaacgtcaaggtgtgaacaagtgg
cgcccagatctcgaagaagaatatgaagacaaagagggtaacatctacaacaagaagaca
tacactgatctgcagcgccaaggactgatctaa

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