Pistacia vera (pistachio): 116118406
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Entry
116118406 CDS
T07386
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvy03009
]
116118406
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
90S particles
Other 90S particles
116118406
Pre-60S particles
Other pre-60S particles
116118406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
INTS1_R4
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
116118406
NCBI-ProteinID:
XP_031260250
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MDDAFEMEDVSTFFSEDEDLCSSILSRLSTSTQDDHQHLCTTIGAISQELKDHNLPLTPV
AYFGAICSSLDLILSSSDQDSSAHRIASLTTLLSIVLPKLPSPILKKKGDYLKDLVVRVI
RLNSVTVVATASGLKILSRLLISRGRVNWSDVSQMYGVIVGFMTDPRLKVRRQSHLCVRE
ILLSFQGTPLLSPASEAITNIFEKFLLLAGGSNSNSNDKPKGAQEVLFMLDAFKECLPLM
SMKYTTTILKYFKTLLELRQPLVTRRITDSLNVICIHPTLEISNEALLELLCSLALSVST
NEINADGMTFTARLLNVGMIKIYSLNRQICVTKLPIVFNALKDILASEHEEAIFAATEAL
KSLINACIDESLIKQGLDQIKKENLDTRKSGPAIIEKLCSTIESLLDYPYSAVWDMSFQV
VSTMFDKLGNDSSYLMRGTLKNLSDMQNLPDEDFPYRKKLHECVGSAVGAIGPETFLSLL
PLKLEAKDLSEVNVWLFPILKQYTIGARLKYFKENMLGMAGLMRQKSQKLEQEGRVLAAR
SADALVYSLWSLLPSFCNYPQDTAENFKELLGVLCTTLREEHDIRGIICSSLQYLVQQNK
NVLEGKNDFIGVEISNARRLAMARYTPQVAADNLSVLKLCARELLSILSRIFLETEKDEG
GCLQSTIGEFASIADKEVVPRLFKRTMQGLLEATQEAGKAKSTRNSYSMQIDDSSNESSC
VFINLDLNCRARLFDLAVSLLPGLNAKEIDVLFVAVKAALEDDEGLIQKKAYKVLSVILR
KCDGFLSSKLEELLGCMIEVLPSCHFSARRHRLDCLYFIIVHVSKDNFEQRRRDILSSFL
TEIILALKEVNKKTRNRAYDVLVQIGHAFGDVENGGGKEYLHQFFNLVAGGLAGETPHMI
SAAVKGLARLSYEFSDLVSNAYKLLPSTFLLFQRKNREIIKANLGFLKVLVAKSPAEGLQ
MHLRSMVEGLLKWQDDTKNHFKAKVKLLLEMLVKKCGIDAVKAVMPEEHMRLLTNIRKIK
ERTERKFAVNPEETRSHFSKATTSRLSRWNHTKIFSDFGDEDSENSDAEYMDTKTVSGRR
SKASSQLKSKASSLRVQKKRKADKSLPEDLFDQLEDEPLDLLDRQKTRSALRSSEHSKRK
SESDDDLEIDSEGRLVIHEGDKPKKVLHSVPDSDARSEVGSIMSMNSTRKNQKHRKTSES
GWAYTGSEYASKKATGDVKRKGKLEPYAYWPLDRKMMSRRPEHRAAARKGMASVVNMAKK
LEGKSASTALSLKPINFKSQKKGSKKTRK
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgccttcgaaatggaagatgtctccacattcttttcagaagatgaggacttg
tgttcttcaatcctctctcgtttatcaacctccactcaagacgaccaccagcacctctgc
accacaattggcgccatatcccaagaacttaaggaccataacctccctctaactccagtc
gcctactttggtgccatctgctcctccctcgaccttatcctctcctcttccgaccaagac
tcgtccgcccaccgcatcgcttctctcaccacccttctctctatcgttcttcctaaactc
ccgtcgccaattctcaaaaagaagggagattacttaaaggacctcgtcgtccgcgttatt
cgattgaactctgttacggttgttgccactgcttctggattgaaaattttatcgcgtttg
ctaatcagtagagggagggtcaattggtctgatgtgtcgcagatgtacggcgtcattgtg
gggttcatgactgatccacgtctcaaggtgagaaggcagtcacatttgtgtgtccgggaa
atcctactaagttttcaaggaactccgctattgtcaccggcaagtgaagcgataacaaac
atctttgagaagtttcttctgctggctggtggatcaaattcaaactctaatgataagccg
aaaggagctcaggaggttctttttatgctggatgctttcaaagagtgtcttcctctaatg
tcaatgaaatatacgactacaatcctcaagtactttaaaaccctccttgaacttcgccag
ccgctggttaccaggcgtataaccgatagtcttaatgtaatttgtatccaccctacactg
gaaatatcgaatgaagctcttcttgagctgttatgttcattggctctttctgtttccaca
aatgagattaatgcggacggaatgacattcactgctcgtttactgaatgtaggaatgata
aagatctattcacttaataggcaaatatgcgtgactaaacttcccattgtattcaatgcc
ctcaaagatattttggcgtctgaacacgaggaggcgatatttgcagccaccgaggcatta
aagagtttgataaatgcttgtattgatgaaagcttgatcaaacagggattagatcagata
aaaaaggaaaacttagatacaagaaaatctgggccagctataattgagaaactgtgttca
actattgagagcttacttgattatccctatagtgcagtatgggacatgtcgtttcaagta
gtttcaacgatgtttgataaattaggaaacgattcttcttatttaatgaggggaaccctt
aagaacttgtctgacatgcagaatctgccagatgaagatttcccttacagaaaaaagctg
catgaatgtgttggatcagctgttggcgcaatcggacctgaaacatttttaagccttctt
cctctcaagttagaggctaaggacctttcagaggtaaatgtttggctgtttcctatactg
aagcagtatacaattggtgctcgtttaaaatacttcaaagagaacatgttgggtatggct
ggattgatgaggcagaaatctcaaaagcttgaacaagaagggcgggttcttgcagcaagg
agtgctgatgctcttgtctattccctgtggtccttgttgccttcattttgcaactatcct
caggatactgctgaaaatttcaaggaattgctgggagtgttatgcaccacccttcgtgaa
gaacatgatattcgtggaattatatgctccagtttgcaatatctagttcaacaaaataag
aacgttctggaaggaaaaaatgattttattggtgttgaaataagtaatgccagacggcta
gcaatggcccgttatacaccccaggttgcagctgataacttgagtgtgctgaagttgtgt
gctcgtgaattattgtctattctgtcacgtatctttttggaaactgaaaaagatgaggga
ggttgtttgcagtccacaattggtgaattcgcttccatagcagataaagaagtagttcca
aggttattcaaaaggacaatgcagggtcttttggaggccacccaggaggctgggaaagca
aaaagtactagaaattcttattctatgcagattgatgattcatcaaatgaaagctcatgt
gttttcataaatcttgatcttaactgcagggcccgactatttgacctggcagtttcactt
ttgccgggtttgaacgccaaagagattgatgttttatttgttgcggtaaaagctgcatta
gaggatgatgaaggtttaatccaaaagaaggcatacaaagtgctttcggttattcttagg
aaatgtgatgggtttctttcatcaaagcttgaggaattgcttggatgtatgattgaagtg
ttgccttcatgccatttttctgccaggcgccacagacttgactgtttgtactttatcata
gttcatgtatccaaggacaattttgagcagagaagacgtgacattcttagctcttttctg
actgaaataatacttgcactaaaggaggttaataagaaaacaagaaatagagcttatgat
gtccttgtccaaattggccatgcttttggggatgtagagaatggtggagggaaggaatac
ttacatcagttttttaacttggtagctgggggactggctggagaaactcctcacatgatc
agtgctgctgtgaaaggcttagctcgcttatcttacgagttttctgatcttgtttctaat
gcatataagttacttcctagcacatttcttctcttccaaaggaagaacagagaaatcatt
aaagccaatttaggttttttgaaagtattggtggctaaatcacctgctgaagggttgcaa
atgcacttgagaagcatggtggaaggcttgctcaagtggcaagatgacaccaaaaatcac
tttaaagccaaggttaagcttcttttggaaatgcttgtcaagaaatgtggcattgatgct
gttaaggctgtaatgccagaagaacacatgagactccttactaatataagaaagatcaag
gagcggacagagagaaaatttgcagttaaccctgaggaaaccagatctcatttttctaaa
gcaactacttcaaggcttagccgatggaatcatacaaaaatattttccgattttggtgac
gaagactccgagaacagtgatgcagaatacatggatacaaagacagtttctggtcgacgg
agcaaggcttcctcacagctaaagtccaaagcatcatcattaagggtccagaaaaagcgt
aaagcagataagagcttgccagaagatttgtttgaccagttagaagatgagccacttgac
ttacttgatcggcagaaaacaaggtcagctcttagatcatctgagcattccaagagaaag
tcagaatcagatgatgatctggagatagactctgaggggcgcttggtgattcatgaggga
gataaaccaaagaaggtattgcattcagtccctgattcagatgcaaggagtgaagtaggc
agtattatgtccatgaactccacaaggaaaaaccagaaacataggaaaacgtctgagtct
ggatgggcatacactgggagtgagtatgctagcaagaaggcaactggggatgtgaagagg
aagggcaagcttgaaccgtatgcttattggcctcttgatcgcaagatgatgagccgtaga
ccagagcatcgggcagctgctcggaaaggtatggctagtgtggtaaatatggccaaaaaa
cttgaagggaagagtgcgtcgactgctctttcattgaaacccataaattttaagagtcaa
aagaaaggcagcaagaaaacaaggaagtaa
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integrated database retrieval system
