Pistacia vera (pistachio): 116118921
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Entry
116118921 CDS
T07386
Name
(RefSeq) agamous-like MADS-box protein TM6
KO
K09264
MADS-box transcription factor, plant
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116118921
Transcription factors [BR:
pvy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
116118921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
K-box
CCDC138_cc
Cor1
Spc29
DUF1192
FUT8_N_cat
ZapB
HOOK
Taeniidae_ag
DUF6689
L31
PUB
Spectrin_Anc-1_2
CdvA
Motif
Other DBs
NCBI-GeneID:
116118921
NCBI-ProteinID:
XP_031260734
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQEITVLCDAKVSLIMFSNTGKFHEFVSS
TTTTKNIFDQYQNTLGIDLWRTHYERMQETYKKLKDVNDKLRKQIRQRIGEDLDDLSIDE
LSSLEQKVTAAADAVRERKYHVIKTQTDTYKKKLKSLEERHGNILLNFEAKYEDPNLNYG
LVDDGDYQSATALSNGAPNLYAFRLYNANFPQGGGGGGGFGPNNLSLG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcggaaagatcgagattaagaggattgagaaccctaccaacagacaggttact
tactctaaacgaagaaatggtatttttaagaaagcacaagaaattacagttctctgtgat
gctaaggtttctctaatcatgttttctaacactggcaaatttcatgagttcgttagctct
accacaacgaccaaaaatatctttgatcaataccagaacactcttggaattgacctatgg
agaacgcactacgagagaatgcaagagacctacaagaaactgaaagatgtcaatgataag
ctaaggaagcagatcaggcaaaggattggtgaagatttagacgatctaagcatagatgaa
ctgagcagtcttgagcaaaaggtgaccgctgcagctgatgccgtccgtgaaagaaagtac
catgtgatcaaaactcagactgacacatacaagaagaagctaaaaagcttggaggaaaga
catggaaacatcctgctcaactttgaagcaaaatatgaggatccaaatctaaattacgga
ttagttgatgatggagattatcaatcagcaacggcactatcaaatggagcacctaacctg
tacgcttttcgcctgtacaatgctaacttccctcaaggaggaggaggaggaggaggattt
ggccccaacaatctcagccttggttga
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