Pistacia vera (pistachio): 116119032
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Entry
116119032 CDS
T07386
Name
(RefSeq) probable RNA-binding protein 23
KO
K13091
RNA-binding protein 23/39
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116119032
Spliceosome [BR:
pvy03041
]
Common components
Common spliceosomal components
General mRNP proteins
116119032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_8
Motif
Other DBs
NCBI-GeneID:
116119032
NCBI-ProteinID:
XP_031260847
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MDFDEYEYLEKTVENPEPSKGKAKENGGGGARKFEERERSRSSKHRSDEKDEDHDDDACR
LKAFKSRDDICDRDRRKERGSSRNRSRSRDGVSDRHKSSREHKDRERDKDRDREERNGRD
KERDRDRERDHDKDRRERERDHDKDRRERERDGERERERDKEKEREQSRRSGSRPERHRS
EQDERERIREQELREREKERELRDRDRENRRYKEKKDDVVEPEADPERDQRTVFAYQISL
KADERDVYEFFSRAGRVRDVRLIMDRNSRRSKGVGYIEFFDVMTVPMAIALSGQLLLGQP
VMVKPSEAEKNLVQSTIAVASGGAIGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGSVE
LVQLPLDETGHCKGFGFVQFSRLEDARNAVNLNGQLEIASRAIKVSAVTDQTGMQDIGAN
TGDFDDDEGGGLSLNARSRALLMQKLDRSGSSTAITGSLGTSVINSTGLTLPVAPALGVS
PAVSSLVPALLQGSAPTLPGQIVTNLPVPTAGIPTIDTIGVPSECVLLKNMFDPKNETYE
DFDLDIXLTYLCLFFY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgagtacgaatacttggagaaaacggttgagaatcctgagccttcgaaa
gggaaggcaaaggaaaatggtggtggtggagctaggaagtttgaagagagagaacggagt
aggagttcaaagcataggagtgatgagaaggatgaagatcatgatgatgatgcgtgtcgc
ttgaaggccttcaaatctagagatgatatatgtgatcgtgatagaaggaaagaaaggggc
tcatcccgtaatcgctcaaggtctagagatggagtgagtgatagacacaagagtagccgg
gaacataaggatagagagagagataaggatagggatagagaagagaggaatgggagggat
aaggaaagagatagggatcgggaacgtgatcatgacaaagacagaagagagcgggaacgt
gatcatgacaaagacagaagagagcgggaacgtgacggtgaaagagagagggaaagggat
aaggagaaggagagagagcagtcacgtcgaagtgggagtcggccagaacggcaccgaagt
gaacaggatgaaagagagaggattcgggagcaggagcttagggaaagagaaaaggagagg
gagttgagggatcgagatagagaaaacagacgatataaagagaagaaagatgacgtggta
gagccagaggctgatcctgaacgggatcagcggactgtatttgcatatcagatttcgttg
aaggctgatgaaagagatgtttatgagttcttctcaagggctggcagagttcgagatgta
cgcctcataatggatcgtaattcaaggagatccaaaggggttgggtatattgaatttttt
gatgtaatgactgtccctatggcaatagcactctctgggcagcttcttcttggtcaacct
gtgatggttaaaccatcagaagctgaaaagaatcttgttcagtcaacaatagctgtggca
tcaggtggagcaattggtccctattcaggaggagctagaagactgtatgttggcaatctg
cattttaacatgacagaagaccaacttcgtcaagtttttgaaccatttggttctgtggag
ctggtgcaattaccacttgacgaaactgggcattgcaaaggttttggttttgttcagttt
tcacgtcttgaagatgctagaaatgcagtgaatttgaatggacagctggagattgccagc
cgggcgattaaggtatcagctgttactgatcaaaccggaatgcaagatattggggcaaat
actggtgattttgatgatgatgaaggcggtggtttgtctctgaatgcacgttcccgagca
cttcttatgcaaaagttggatcgtagtggcagtagtacagctataactggttcgctaggc
acctctgttatcaatagcacaggccttacattaccagtggcaccagcccttggagtttca
cctgcggtttcttcccttgttcctgctcttttacaaggttctgctcctactcttcccggg
caaattgtcactaatcttccagtgcccactgctggcattcctactattgatacaatcggt
gttccaagtgaatgtgttctgttgaagaatatgtttgatccgaaaaatgagacgtatgaa
gacttcgatctggatatcnttttaacttatttatgtttattcttttactaa
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