Pistacia vera (pistachio): 116119157
Help
Entry
116119157 CDS
T07386
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvy01009
]
116119157
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116119157
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116119157
Protein phosphatases and associated proteins [BR:
pvy01009
]
HAD phosphatases
Fcp/Scp phosphatases
116119157
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116119157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_CPL3
NIF
BRCT
PTCB-BRCT
NADH-UOR_E
Motif
Other DBs
NCBI-GeneID:
116119157
NCBI-ProteinID:
XP_031260957
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MGLEEGEISDTASVEEISEDVFNNNQEVVVLKESKPKGESARVWTMRDLYNKYPTICRGY
ASAGLYNLAWAQAVQNKPLNDIFVMDVEQDEVSKRSSPSSSVASVNSKEVVKKEVDKVVI
DDSGDEKEEGELEEGEIDLDLESVEKVIEEKDLVNGDGLDKKVESIIGDLESVVNVIDAD
KSFQGVCSKLQNALESLREVIFDNNVLPRRDALIQLAFSAVQAINSVFCSMNNDLKEQNK
DILSRLLSLVKSHYPPLFLPEQMKEIEAVVSSLDSRNIFLGAIASNKEKEMMDIDGLNKT
DCNALAESAGHDLTLKHKLLPVESSIYNKHNMLLEASKPGLPGVKSRVLLPLLDLHKDHD
ADSLPSPTRETTPSLPARTALTVGDGMVKSGLTTAKAAHDSEDIKMRYYETDVLKAVSSY
QQKFSNSSFFSNDRLPSPTPSEESGEGDGDTGGEISSSSTIDKSKVVNPPVSVQEAVSSS
QRMDNSSIQGFFNARNTASVSSGSNPIVKASVRSRDPRLRFANPDALDLNQRPVPMVHNA
PKAEPVGGIMSSRKQKTMEEASFGGPATKRQRHRTENYGVGREAKTVHGSSGWLEDTNMV
GPKIPNRNQFVESAVSDPKKLENGTTCPSVTVGTQNVVASRNEPVPVTVPSTTASLPALL
KDIAVNPTVLLNILKMGQQQRLTVEAQQKSNDPLRSMMHPPSLSPIVRSVPLENVALSTP
SVVLPKPTGTVQVPSPAASLDEVGKVRMKPRDPRRVLHGNSLQRSGSLGPELLKTDGPLT
SNTQGGKDSLNSQKQQGQAETKQVQSQSVPPPDITRQFTKTLKNLADIMSVSQASTNQPM
VSQNLPCQSSQIKLERTDVTTVAPNNDDKQSGAGAATDGPVGPPPQSSPTGLPVQNTWGD
VAHLFEGYDELQKAAIQRERTRRIEEQKKMFAARKLCLVLDLDHTLLNSAKFNEVDPVHD
EILRKKEEEDREKPQRHLFRFPHMSMWTKLRPGIWKFLERASKLYELHLYTMGNKLYATE
MAKVLDPKGVLFNGRVISRGDDGDPFDSDNGGPPKSKDLEGVLGLESGVVIVDDSVRVWP
HHKMNLIVVERYIYFPCSRRQFGLPGPSLLEIDVDERAEDGTLASSLMVIERIHQDFFSH
QSLDDADVRSILVMEQKRILAGCRIVFSRVIPIGEANPHLHPLWQTAEQFGAVCTNQIDE
QVTHVVANSLGTDKVNWALSTGRFVVYPSWVEASALLYRRANEHDFAVKT
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgggcttagaggaaggtgaaatttctgatacagcgtcagttgaagagatcagtgaagat
gttttcaataataatcaggaagttgttgttttaaaagaatcgaagccgaaaggtgagtct
gctagggtttggacgatgcgggatctgtacaataaatatccgacaatttgtcgaggatat
gcgtcggctggtttgtataatcttgcgtgggcccaggcggttcagaacaaacctctgaat
gatatatttgttatggatgttgaacaagatgaggtgtcgaagagatcgtcaccgtcgtcg
tcggtggcgtctgttaatagtaaagaagtagttaagaaggaagtggataaagttgtgatt
gatgatagtggtgatgagaaggaggaaggtgagttggaggaaggggagattgatttggat
ttggaatcggttgagaaagttattgaagagaaggatttagttaatggtgatggtttagat
aagaaagtagagtctattataggagatttggagagtgttgttaatgtgattgatgctgac
aaatcatttcaaggagtttgttcaaaacttcaaaatgctttggagagcttgcgggaagtg
atttttgacaataatgttcttcccagaagagatgctctcattcaactagcgttttctgct
gttcaagctattaattctgtgttctgctcaatgaataatgatttgaaagaacagaataag
gacattttgtcaaggttactttctcttgtcaagagccactatcctcctctttttctccct
gaacagatgaaagagatagaggccgtggtatcctctctggactcccgaaatatttttctg
ggtgctatagcaagcaacaaagagaaagagatgatggacatagatggactgaacaaaacg
gattgtaatgctctagctgaaagtgctggccatgatttgactcttaaacataagttgcta
cctgttgaatcttcgatatataataagcataacatgttactggaagcttcaaaaccaggt
ttacctggtgttaagagtagagttttgctcccactgcttgacctacataaggaccatgat
gctgacagcctcccatcacccacaagggaaacaacaccatctctacctgctcgcacagca
ttgactgttggagatggtatggttaagtcagggttgaccacagccaaggcagctcatgac
tcagaagatattaaaatgcgttattatgaaactgatgtcctcaaagctgtttcttcctat
caacagaaattcagtaatagttcattcttttccaatgatagacttccaagcccgaccccg
tcagaggagtctggtgagggggatggtgatactggtggggagatatctagttcctccacc
attgataaatctaaagttgtaaatccacccgtttcagtgcaagaagctgtttcttcttca
caacgcatggacaattccagcattcaaggattctttaatgctagaaatactgcatctgtt
agctcaggatctaatccaattgtgaaagcatctgttcggagtagagaccccaggcttcgg
tttgcaaaccctgatgcattggatctcaaccaacgtcctgtacccatggtgcataatgca
cctaaagcagaacctgttggtggaattatgagttcaagaaagcaaaagacaatggaagag
gcttcttttgggggtcctgcaactaaaaggcaacgacacagaacagaaaattatggagtt
ggtagggaagcaaaaactgtgcatggaagcagtggctggttggaggacaccaatatggtt
gggcctaagattccaaacagaaatcagtttgtagaatctgcagtctctgatcccaagaaa
ttggagaatggaactacttgtcctagtgttactgttggtacacagaatgtggttgctagc
agaaatgagccagtgccagtgactgttcctagtaccacggcctctttgcctgctttattg
aaagatattgcagtgaatccaactgtgttactaaatatacttaagatgggacaacaacag
agattaacagtagaagcccagcagaagtctaatgatcctttaagaagtatgatgcatcct
ccaagtctgagtccgattgtgcgatcggttcctttggagaatgttgctctgtcaacaccc
tcagtggttttaccaaaaccaacaggaacagttcaggttccttctccagcagcttctttg
gatgaggtgggaaaagtccgcatgaaacctcgtgaccctcgacgtgttctccatggaaat
tcacttcaaaggagtgggagcttgggacctgagctgttaaaaactgacggacctttgact
tctaatacccagggaggcaaggatagtttgaattcccaaaagcaacagggtcaagcagaa
acaaaacaagtgcaatctcaatcagttccacccccagatattacgcggcaattcaccaag
actttgaagaatcttgctgatattatgtctgtgtcccaagcatcaacaaatcaaccaatg
gtttcacagaatcttccatgtcaatcatcacagattaaattggaaagaacagatgtgaca
actgtagctccaaataatgatgataagcaaagtggagctggtgcggctactgatggacct
gtaggtcctccgccacagagctctcccactggtcttcctgtacagaacacatggggagat
gttgcacatctttttgaaggatatgatgaactgcaaaaagccgctattcaaagagagagg
acaaggaggatagaagaacagaagaagatgtttgctgcacggaagctttgtctcgtcttg
gatctagatcatactcttcttaattcagctaagttcaacgaagtagatcctgtgcatgat
gagatattgagaaagaaagaggaggaggatcgtgaaaaaccacagagacatctgttccgc
tttcctcatatgtcaatgtggaccaaattgaggcctgggatctggaaatttttggagaga
gctagtaaactatatgagctgcatctttatacaatggggaacaagctatatgctacggag
atggcaaaggtgcttgaccctaaaggggttctgtttaatggacgagtcatctctagaggt
gatgatggagatccttttgacagtgataatggtgggcctcctaagagtaaggatcttgaa
ggggtgttgggtttggaatctggtgttgtgattgtagatgattctgttagagtctggcca
catcacaaaatgaatttgatagttgtagaaaggtatatttattttccttgtagtaggcgc
cagtttgggcttccaggtccttctcttcttgaaattgatgtagatgagagagctgaagat
gggactttggcatcttctttgatggttattgagagaatacaccaggactttttctcccat
cagtctttagatgatgcagatgttagaagtattctagtgatggagcagaaaaggattttg
gctggttgtcgtatagtatttagcagggtgattccaattggtgaagccaatcctcatcta
catccgctgtggcagacagctgaacaatttggtgctgtatgcacaaatcagattgatgaa
caggttactcatgtagttgccaattcccttggaactgataaggtgaattgggcactatcc
accggaagatttgttgtctatcctagctgggtggaagcatcagccttgctttatcggagg
gcaaatgagcatgattttgctgttaaaacataa
DBGET
integrated database retrieval system
