Pistacia vera (pistachio): 116119282
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Entry
116119282 CDS
T07386
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03082
ATP-dependent chromatin remodeling
pvy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116119282
03083 Polycomb repressive complex
116119282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvy03036
]
116119282
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116119282
Histone modification proteins
HAT complexes
HATB complex
116119282
HDAC complexes
Sin3A-HDAC complex
116119282
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116119282
PRC2.2
116119282
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116119282
Heterochromatin formation proteins
Other heterochromatin formation proteins
116119282
Chromatin remodeling factors
NuRD complex
116119282
NuRF complex
116119282
NuRF complex (fruit fly)
116119282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116119282
NCBI-ProteinID:
XP_031261071
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MDQQQAPKKRGRKPKPKEDKKDEQQQTPKMKDTAKRTQYHSVDDKYTQWKSLVPVLYDWL
ANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEH
ISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHA
VLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITTSTTDPAT
AKSAGSGGSIIKPNPKPGEGNDKAGDGPSVGPRGIYCGHEDTVEDVTFCPSSAQEFCSVG
DDSCLILWDARVGSNPVIKVEKAHNADLHCVDWNPNDDNLILTGSADNSVRMFDRRNLTS
NGVGSPIHKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEHGSRSPSS
PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEEEV
LAELEKFKSHVISCGSKS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaacaggcacccaagaagcgaggccgtaaacccaaacctaaggaagacaag
aaagacgaacaacaacaaacacctaagatgaaagacaccgccaagagaactcagtatcac
tctgttgacgacaagtacactcagtggaaatctcttgttcctgttctttatgactggctc
gctaatcacaacctcgtttggccttctctctcttgccgatggggcccgcagcttgagcaa
gctacttacaagaatcgtcaacgtctttacctttctgaacagactgatggtagtgttccg
aatacactggttattgcgaattgtgaggttgtcaaacctagggttgcagctgccgaacac
atttctcagtttaatgaagaggcacgatctccatttgtcaagaagtacaagaccatcata
catcctggagaggtcaacagaatcagggagcttccacaaaatactaagatagtggccacc
cacactgacagtccagatgttctcatttgggatgttgaagctcaacctaaccgccatgct
gttcttggagctactaattctcgcccagatttgattttgactggacatcaagataatgca
gaatttgctcttgctatgtgccctacagaaccctatgtgctctctggaggtaaggacaaa
tcggtggttttatggagtatccaggaccatataacaacatcgaccacagatccagccaca
gctaaatctgcaggatcaggtggatcaatcattaaaccgaatcccaagcccggcgaaggt
aatgataaagctggtgatggtccttctgttggtccacgaggtatctactgtgggcatgag
gatacagttgaagatgtgacattctgtccatccagtgcacaggagttctgtagcgtaggt
gatgattcttgccttatcttatgggatgcccgagttggttcaaacccagttattaaggtt
gagaaagcacataatgctgatctgcactgtgttgattggaatcccaacgatgataatctt
atacttaccgggtcagctgataattctgtgcgcatgtttgatcgtcggaatctgacttcc
aacggggttgggtcacctatccataagtttgagggtcacagagctgctgttctctgtgtg
cagtggtctccagacaaatcatctgtatttggaagttctgcagaggatggtctcttaaac
atttgggattatgagaaggttggtaaaaaggtggagcatgggtcaaggtctcctagttct
cccgcaggcttgtttttccagcatgctgggcacagggacaaagttgttgatttccattgg
aatgcatctgatccatggactgttgttagtgtctctgatgactgtgatacgacaggtgga
gggggcacactgcagatatggcgcatgagcgatttgatctataggccagaagaagaggtt
ttagcggagcttgaaaagtttaagtctcacgtaatctcatgtggttctaagtcatga
DBGET
integrated database retrieval system
