KEGG   Pistacia vera (pistachio): 116119478
Entry
116119478         CDS       T07386                                 
Name
(RefSeq) WD repeat-containing protein RUP2-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy04120  Ubiquitin mediated proteolysis
pvy04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116119478
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    116119478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvy04121]
    116119478
Enzymes [BR:pvy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116119478
Ubiquitin system [BR:pvy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116119478
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     116119478
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_WDHD1_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_DCAF12 EIF3I WD40_like Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_NWD2_C WD40_RFWD3
Other DBs
NCBI-GeneID: 116119478
NCBI-ProteinID: XP_031261283
LinkDB
Position
Unknown
AA seq 403 aa
MKNFSTRFHLPLEQQEAQNQERKDTEKRNTEEDKPAAETKEQEEERAKSEWDFNLCTIVS
SDATGAASDTLGVIEFDPSDSIMATGGIARKIRVYNIKSLLPEDNNFQDVNLLEHSSAFD
YCICTPAKLSSLRWKPGTSGRVLGSGDYDGVVMEYDLERRVPIFERDEHGGRRVWSVDYS
QWDPVVGASGSDDGTMQMWDPRCDGGKCMAKVQPSVSRSSVCCVEFHPFGGALVAVGCAD
KKAYAYDVRNMVDPVLVFDGHRKTVTYIRFMDESTLVSAGTDGCLKLWNINDSRIIRNYK
GHVNSRSFVGLSVWKNGGLLCCGSETNQVFVYDKRWGEPIWVHGFKPVGADGAESGSERG
FVSSVCWRQVGKEQCTLVAGGSDGVLQVFMGERKASSSSSSAY
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgaaaaacttttccacaagattccaccttccactcgaacaacaagaggcccaaaaccaa
gaaaggaaagacacagaaaaaagaaacacagaagaagataaacctgcagctgaaacaaaa
gaacaagaagaagaaagagcgaaaagcgaatgggatttcaatctttgtaccattgtttct
tcagacgccactggagccgcatcagataccctcggtgtcatcgaattcgacccctctgat
tccatcatggcgaccggaggaattgcaagaaagattagagtttataatataaagtctttg
ttgccggaagataataatttccaagatgttaatttgttagaacactcgagcgcatttgat
tattgtatttgtaccccggctaagctgagtagcctgcggtggaaacccggaaccagcggg
cgggtcttgggatccggagactatgatggagtagtgatggagtatgatctggagagaaga
gtgccaatatttgaacgtgacgagcatggtgggagacgggtttggagcgtggactattcg
caatgggatccggttgtgggagcatccggatccgacgatggcaccatgcaaatgtgggat
ccacgttgcgatggtgggaagtgtatggccaaggtgcagcccagcgtgtcacgtagttcg
gtttgttgcgttgagtttcatccgtttggtggagcattggtagccgttggatgcgctgac
aagaaggcttatgcgtacgacgtccggaacatggttgaccctgtacttgtatttgacggg
cacagaaaaacagtaacatacattcggttcatggatgaaagtactctggtatcagcagga
acggatggatgtttaaagctctggaacataaatgattcgcgaataattagaaattataaa
ggacatgtgaacagcagaagtttcgttggtttatcagtgtggaaaaatggaggattactg
tgttgtggctcagaaacgaatcaagtgtttgtgtacgacaagaggtggggcgagcccatt
tgggtgcatgggttcaagccagtgggtgcggatggagccgagagtgggagtgagcgtggg
ttcgtgagtagtgtgtgttggagacaagtggggaaagagcagtgcacacttgtggcagga
ggatcagatggggttctgcaagtttttatgggcgaaaggaaggcatcctcatcgtcatca
tcggcttattag

DBGET integrated database retrieval system