Pistacia vera (pistachio): 116119502
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Entry
116119502 CDS
T07386
Name
(RefSeq) flap endonuclease GEN-like 2 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116119502
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116119502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Motif
Other DBs
NCBI-GeneID:
116119502
NCBI-ProteinID:
XP_031261308
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLKKVNTSYASHYDKLYLRGLFHR
LRALIALNCTLIFVTDGSIPAIKLSTYRRRLNVGSEVTENEANSDKAASLRRNMGSEFSC
MIKEAKALGLALGVPCLDGIEEAEAQCALLNLESLCDGFFSSDSDIFCFGAKTVYRDISL
GEGGHVVCYEMVDIQRKLGFGRNSLITMALLLGGDYSKGVHGLGPESACQIVKSIGDNVV
LQQIASEGLSLVKKARNSRNLNGIDRYSPGENQFLAVIDAYTKPKCHSADSDAVYRVLVQ
HPFLRTKLHHICAQFFEWPPEKTDEYILPKIAERDLRRFANLRTSSAGVELPLHKMPVKC
PVTAIIKPRKVQGTECFEVSWQESYGLKSSVVPAELIQSACPEKIVEFKERRAAPRTKKS
KPRSRVSEIDQKLQALMLDIESESSAVHNVTFSSKTVMPENNSGVSEVNFTRHDTLLIAE
SESNGDGNPTMPLYQTAIESDIKADGNATNTMPSNPTAPTVAKDEVIDLISPSPACCRNV
TRSRKMNDQPISVIDLSDSETERSPEHERKARELRLFLASVREEKL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaagaatttatgggatattctagaatcatgcaagaaaactcttccacttcac
catcttcagaacaagagggtctgcatagatctatcttgttggatggtgcaacttaaaaag
gttaacacatcttacgcttctcactacgacaagctctatctcaggggtctctttcaccgt
ctcagagctcttattgctttgaattgcaccctcatctttgttactgatggctcaattcct
gcgatcaaattatccacttacagaaggcgcttgaacgtagggtctgaggtgactgagaat
gaagcaaactcagataaagcggcatcacttcgaagaaatatgggatctgagttctcatgc
atgattaaagaagcaaaagctcttggattagcattaggggttccttgcttagatgggatt
gaggaagctgaagcacagtgtgcactattaaatttggaatcgttgtgtgatggatttttc
tcatcagattctgatatcttttgttttggtgcaaagacagtgtacagggacattagcctt
ggggaaggaggccatgttgtttgttatgaaatggttgatatacaaagaaaacttggattt
ggaaggaactcattgattactatggcccttcttcttggaggtgattactccaaaggagtt
cacggtctaggcccagagtcagcatgccagattgttaaatccattggagataatgttgtt
cttcaacaaattgcctcagagggactgtccttggtaaaaaaggccagaaattcaaggaat
ttaaatggaattgatcgttattcgccaggagagaatcagtttttggcagtgattgatgca
tacacaaagccgaagtgtcactcggcagactccgatgctgtctacagggttcttgttcaa
catccatttttgcgtactaaacttcaccatatatgtgcacagttctttgagtggcctcca
gagaaaacagatgagtatatccttccaaagatcgctgaaagagatttacggcgatttgct
aatttgcgcacttcatcagcaggagttgaacttccactacataagatgccagttaagtgc
cctgtaacagcaattattaaacctcgtaaagttcagggaacagaatgctttgaggtctca
tggcaagagtcgtatggcctaaaaagttccgtggttccagcagaactgatacagagtgca
tgtcctgaaaaaatcgtggagtttaaagagagaagagctgccccaagaacaaagaaatcg
aaacccagatctcgtgtgtctgaaattgatcagaaactccaagctctgatgcttgatatt
gaatcagaaagcagtgccgttcacaatgtcaccttttcttcaaaaacagtgatgccagaa
aacaattctggtgtttcagaagttaattttacaaggcatgatacattacttattgcggag
tcagaaagcaatggtgatggcaatcctacaatgcctttgtatcaaactgctatagagtcg
gacattaaggctgatggcaatgccacaaatacaatgccttcgaatccaactgctccaact
gttgctaaagatgaagtcattgatcttattagcccttcaccagcatgctgccgtaatgtt
accagaagtcgaaaaatgaatgatcagcctattagtgtaattgatttaagtgattcagaa
actgaaagatcacctgagcatgagcggaaagctagagagcttcgattgtttctagccagc
gtcagagaagaaaaactctga
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