KEGG   Pistacia vera (pistachio): 116119745
Entry
116119745         CDS       T07386                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    116119745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116119745
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116119745
SSDB
Motif
Pfam: XPG_N XPG_I UBM
Other DBs
NCBI-GeneID: 116119745
NCBI-ProteinID: XP_031261538
LinkDB
Position
Unknown
AA seq 1601 aa
MGVHGLWDLLAPVGRRVSVETLAGKRLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR
RICKLLFLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK
ELAKDLEDQRKKQNNASKGEKILSDQIAVTWRSLGKNDAALASSNKGNRDAMLAASATAN
LFQEDGDEDEEMMMPIMDGNVDPAVIAALPPSMRLLVQKQEHDVKGKKILYDDDLDQTDL
VGSNEERSHVASKSNDCEKLDEMLAASIAAEEHGSLTDNASITAASIPFEEEDGDEDEEM
ILPAMHGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIRAYL
KTVAFRREIDEVQKAAAGRGVGGIQTSRIASEANREFIFSSSFTGDKQVLASAKVGSTAD
KQQQKPSRRPSSASRDNASSCSESNAVTGLAPEERGAVFDDIETYLDERGRVRVSKVRAM
GIRMTRDLQRNLDLMREIEQERVNTNNTIDVESNSLLRINEIGSSNNFSGKNEFVETSPD
DNSGFVNKERNKQSMFKNEKVIQISFEDNGENNRVDDDDVFARLAAGSPVEVVSTDNTPS
KEQSFNSISDSDWEEGNVEEKVNSLSNDVNAEINPAPYRKEGNINDESEVEWEGGPSGAP
KSSSACFTESGKTVPRGHLEEEANLQEAIRRSLLDLCSEKSDYVLSDDENCKRSGENACD
DVGFLDEKNNTSGSNLLGENATRQDEPVCEIRDGENLGTAGGVSDSQVTNALESQLKSVV
HNPNNKETLSKSCEKYPSSLPEQSRQDASEGRSLYGDVARAESVATFGMKEQHFVQGQCF
DASNKGGELATFTKRCSEDNSHGADLVFSDMSGSILVDDKKNNSEVGCSAVLDSYMSDAI
LVGDKKNTSEVECSALLDDKESELVAESSIMISGKKNDCEAEPLHQTIVSSDPYSSMVDS
SLNESMYKNNTQQNLAAERTHDCEFSGREHNIEKSELKENDNMQVEFTEANLEEEMLILD
QECMNLEDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAFMEIVNLVD
GVVTDDSDVFLFGAQSVYKNIFDDRKYVETYFMQDIEKELGLTREKLIRMALLLGSDYTE
GISGIGIVNAIEVVNAFPEEDGLHQFREWIESPDPTILGKFDVQTVSNARKRASKVGDNS
MSQIKCSREGLSVGGQNVLQADENKWSADHSQDIKKIFMDNHRNVSKNWHIPSSFPSEVV
ISAYTCPQVDKSTEPFSWGKPDLFVLRKFCWDKFAWGSQKSDELLLPVLKEYEKRETQLR
LEAFYTFNERFAKIRSKRIKKAVKAITGNQSLELMGEAGQEVPKSRKKKRADHLENGNSI
SAKDSEESVAGAKNNREKSTPKQLRKRRVTEKIVSSERENPESLICADGGRNTNEISHGI
GRGRGRRRKRLCADLTETSSSDGVGGNEKLEGPQELRRSSRSRKSVNYCMNDQEIDDGSK
IWSNKECSNEEAGEQQLFEVHGLAGDASADPFRKEQHKAGDPLLEEGSSGDYLERGGGFC
VDEGEIGEPNVSQNEDPFCEAEFSKDHLIMGGGFCLDESES
NT seq 4806 nt   +upstreamnt  +downstreamnt
atgggagttcacggtctttgggacctactggctcccgttggccgccgcgtttccgtcgaa
acccttgccggaaaaagactcgccattgacgcgagcatatggatggtccagttcatgaag
gctatgagagacgagaagggagagatggtgcggaacgcacatttgataggcttttttcgc
cgaatttgtaaattattgtttctgaagacaaaaccagtttttgtcttcgatggaggaaca
ccggcgctcaagcgccgcacagtcattgctcgccggaggcaacgtgagaacgcccaggct
aaaatccgtaaaactgctgagaaattgctgattaatcatctcaagacaatgaggttgaaa
gaattggcaaaagatcttgaggatcaaagaaagaagcagaataatgcatctaagggcgag
aagattttgtccgaccaaatagctgtcacttggagaagtctgggaaaaaatgatgcggct
ttggcttctagcaacaagggaaatcgagatgcaatgctggcagcatcagctactgcaaat
ctctttcaggaagatggtgatgaagacgaagagatgatgatgccaataatggatgggaat
gttgatccagctgttatagcagctttgccaccatcaatgcgtctacttgttcagaagcag
gagcatgatgttaagggcaagaagattttatatgatgacgacctagatcaaacagatttg
gtgggaagtaatgaggaaagaagtcatgttgcatcgaagagtaatgattgtgaaaagctt
gatgagatgttggcagcatctattgcggcagaggaacatgggagtttaactgacaatgca
tcaataactgctgcttcaattccttttgaggaagaggatggtgatgaagatgaagagatg
atattgccagctatgcatgggaatgttgatccagctgttttagctgctcttcctccatca
atgcaactggatcttcttgttcagatgagagagcggttgatggcggaaaacagacagaag
tatcaaaaagtcaagaaggcacccgaaaaattctctgagctacaaatacgggcttatctt
aaaactgttgctttccggcgggagatagatgaagtgcagaaagctgctgctggaagaggg
gtaggtggcatccagacttcaagaatagcctctgaagctaacagagaatttattttttca
tcatcatttactggggacaaacaagtgcttgcatctgctaaagtagggagtactgcagat
aagcaacaacagaagccatcaaggcgtccttcttcagcgtccagggacaatgcatcatcc
tgcagtgaatccaatgctgtaacaggattggccccagaggaaagaggagcagtttttgat
gatatagagacatatctggatgaaagagggcgtgttcgtgttagtaaggtcagagctatg
gggattcgtatgactcgtgatttacaaaggaatttggatctgatgagagagattgagcaa
gagagagtaaatacaaacaatacaatagatgtggagtcaaattcattgctcagaataaat
gaaataggttcctcaaataatttttctgggaaaaatgagtttgttgaaacttcacctgac
gataatagtggatttgtaaacaaagagagaaacaagcagtcaatgtttaaaaatgaaaaa
gttatacagatatcatttgaagacaatggtgagaacaatcgtgttgatgatgatgatgtt
tttgctcgtttagctgcaggaagtcctgtagaagttgtttctactgacaatactccttca
aaggaacagtcttttaattcaatttcagatagcgactgggaagaagggaatgttgaagaa
aaagttaatagtctttctaatgatgttaatgcagaaattaaccctgctccttatcgtaag
gagggcaatatcaatgatgaaagtgaagtggaatgggaaggaggacctagtggtgctccc
aaaagttcctctgcctgttttacggaatcaggaaaaacagttcctagaggtcatttggaa
gaagaggctaatttgcaggaggcaataagaagaagtctcttggatttatgtagtgagaaa
tctgattatgtcttatctgatgatgaaaattgtaaaagatctggagaaaatgcttgtgat
gatgttggatttcttgatgaaaagaataatacgagtgggtcaaatctgttgggggagaat
gctactcgacaagatgaaccagtttgtgaaattcgcgatggagaaaatctgggtactgca
gggggagtaagtgactcacaagttactaatgctttagagagtcagttgaagtctgtagta
cataaccctaataacaaggagacactaagtaaatcatgtgaaaagtaccccagttccctt
cctgaacaatcaaggcaagatgcaagtgaagggaggtctttgtatggagatgtggcacgt
gcagaatcagttgctactttcggaatgaaggagcaacactttgttcaagggcaatgcttt
gatgcttctaataagggtggtgagctagctacctttacgaaaaggtgttctgaagataat
tctcatggtgctgatttagtatttagtgacatgtctggttccattttggttgacgacaag
aaaaataattctgaagttgggtgctctgctgtccttgatagttacatgtctgatgccatt
ttggttggtgacaagaaaaatacttctgaggttgagtgctctgctctccttgatgataag
gaaagtgaacttgtcgctgaatcctcaattatgatcagtggtaagaaaaatgattgtgaa
gctgagccactgcatcaaacaattgtgtctagtgatccgtacagctccatggtggattca
tctctgaatgaatcaatgtacaaaaataatactcagcaaaatttggctgcagaaagaacc
catgattgtgaattcagtggtagagagcacaatatagagaaatctgaacttaaggaaaat
gataacatgcaggtggagttcacagaggctaatttggaagaggaaatgctaatcttagat
caagaatgtatgaatctagaagatgagcaaaggaagctagaacgcaatgctgaatctgtt
agcagtgagatgtttgccgaatgccaggaactgctgcaaatgtttggcctaccctatatt
attgccccaatggaagcagaagctcaatgtgcttttatggagattgtgaatcttgttgat
ggtgttgtgactgatgattctgatgtgttcttgtttggagctcaaagtgtttacaagaat
atatttgatgatcgcaaatatgtggagacatacttcatgcaggacattgaaaaagagctt
ggtctgaccagggaaaaacttattcgcatggcactgcttcttgggagtgattatactgaa
gggattagcgggattggtattgtcaatgccattgaggttgtaaatgcattccctgaggaa
gatggtcttcaccaattccgggagtggattgaatcaccagatccgaccatccttgggaag
tttgatgttcaaactgtatcaaatgcaaggaaaagagcatcaaaagttggtgacaatagt
atgagtcagataaaatgcagcagggaaggactctctgtaggtggccaaaatgttcttcaa
gctgatgagaacaagtggtctgcagatcacagccaagacataaagaagattttcatggat
aatcatagaaatgtgagcaagaactggcatataccttcctccttcccaagtgaagttgtt
atttcagcatatacttgtccccaagtggataaatcaactgagcctttctcatggggaaag
ccagacctttttgttctgcgcaaattttgctgggataagtttgcatggggaagtcagaag
tcagacgagctgctccttcctgttttgaaggagtatgagaaacgagagactcaactgaga
ctagaagcattttacacttttaatgaaagatttgcaaaaattcgtagcaagagaattaag
aaagctgttaaagcaataactggaaaccaatccttggagttgatgggtgaggctgggcag
gaagttcctaaaagtagaaagaagaagagagcagatcatcttgaaaatggaaatagtata
tcagcgaaagattcagaggaaagtgttgctggagccaaaaacaatagggaaaagtcaact
cctaagcagttaaggaaaaggagggttactgaaaagattgtttcatccgaaagggaaaat
ccagagtcattaatatgtgctgatggtgggcgaaataccaatgaaatatcacatgggatt
ggaagaggtagagggaggagaagaaaaaggctttgtgctgacttaactgaaaccagctct
agtgatggcgttggtggaaatgagaagctagaagggccacaagaactgcgaaggtcaagt
cgttcacggaagtctgtaaattactgtatgaatgaccaagaaattgatgatgggagcaag
atatggagtaataaagaatgctcaaatgaagaggcgggagaacaacaattatttgaagtt
catggcctagctggagatgcttcagctgacccctttagaaaggaacaacataaagcaggt
gatcctttgcttgaggagggatcttctggggactaccttgaaagaggaggtggattttgc
gttgatgaaggtgaaattggtgagccaaatgtgagccagaatgaggatcctttttgtgag
gcagaattctccaaagatcacctgataatgggcggtgggttttgcttagatgaaagtgaa
agttga

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