Pistacia vera (pistachio): 116119946
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Entry
116119946 CDS
T07386
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00040
Pentose and glucuronate interconversions
pvy01100
Metabolic pathways
Module
pvy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116119946
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116119946
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
116119946
NCBI-ProteinID:
XP_031261744
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All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MSKPESSPLQKICTTLLVLSMAYCGSGLQNYGTGPGFNYVVNVMKMGAVGDGRKDDSQAF
LRAWAAVCGANKTAPLLLIPAGRTFLLKPVKFQGPCTSSAINFKILGNIMAPDMTAWKGD
DRQNWLVFENINWLKIDGNGQIDGRGASWWQQESEPEKRPAALTFNKCTNLRLNQLKHIN
SPRNHITVTGCRNVVISHLNITAPGSSPNTDGIDIGQTRNVYIHDCNIETGDDCIAIGTE
SFNFKISHVTCGPGHGISIGSLGANGAMARVKNINVSDCSFKGSTNGARIKTWQGGSGFA
KEIYFQRIHLDAVANPIIIDQYYCPVPGNCPNQTSAVKVSDVFYNNFEGTSSSEKAIILN
CSQSIGCDNLRLTDIFIKSSVQGAGCQSSCLNAQATVSNSVPAVKCLKRK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcctgagagttctccattgcagaaaatttgcactacattattggttttgtcc
atggcatactgcggatcaggccttcaaaactatgggacaggacctggttttaattatgtt
gttaacgtgatgaaaatgggggccgttggcgatggcagaaaagatgattcacaagctttt
ttgagagcttgggcggctgtttgtggagcaaacaaaaccgccccacttctgcttatacca
gccgggagaacattccttttgaagccagtaaagtttcaaggtccatgcacatcctctgcc
attaattttaagattctcggaaatattatggcacctgatatgacagcttggaaaggtgac
gataggcaaaactggcttgttttcgaaaacataaactggcttaaaattgatggaaacggg
caaattgatggacgaggtgcaagctggtggcagcaagaaagtgaacctgagaaaagacct
gctgctttgacgtttaacaaatgcactaacctccgtctgaatcaattgaaacacatcaac
agcccaaggaaccatattactgttactggttgcaggaatgtagtcatttctcatctaaat
attactgctcctggttcaagtcccaacaccgatggcatcgatatcggccagaccaggaat
gtttatatccacgattgtaacattgaaactggtgatgactgtattgccattggtactgag
tccttcaacttcaaaattagtcatgtgacatgtggaccaggtcacggcataagtattgga
agtttgggagcaaatggagctatggctagagttaaaaatataaacgtcagcgactgtagc
ttcaaagggagtacaaatggagcaaggattaaaacatggcagggaggatctggatttgcc
aaggagatttactttcagagaattcatcttgatgcagttgccaaccctattatcatagac
caatattattgtccagttcctggaaactgcccaaatcagacatcagctgttaaagtgagc
gatgttttctacaataatttcgaagggacttcaagctcggagaaagcaattatattgaat
tgcagccagagtattggttgtgacaatcttagacttacagacattttcataaaaagttct
gttcagggggcaggctgccaatcctcatgcctcaatgctcaagcaacagttagtaattca
gttcctgccgtaaagtgtttaaaacgtaaatag
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