Pistacia vera (pistachio): 116120266
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Entry
116120266 CDS
T07386
Name
(RefSeq) oligouridylate-binding protein 1B isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116120266
03041 Spliceosome [BR:
pvy03041
]
116120266
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116120266
Spliceosome [BR:
pvy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116120266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
116120266
NCBI-ProteinID:
XP_031262074
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MQHQRLKQQQQQQQQALMQQAILQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVY
VGNIHTQVTEPLLQEVFSSTGPVEGCKLIRKEKQSSYGFIHYFDRRSAAMAILSLNGRHL
FGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKT
GRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNDDKQSSDAKSVVEL
TNGSSEDGKETTNNEAPENNLQYTTVYVGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRD
KGFGFVRYSTHAEAALAIQMGNTQSYLYGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPG
LSAADLLAYERQLAMSKMGGVHAALMHPQGQHPLKQAAMGVGSAGASQAIYDGGFQSVAA
AQQLMYYQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggctgaagcagcaacagcagcaacaacaacaagctttaatgcaacaa
gccattcttcaacaacaatctctctaccatcccggcctcttagccgctcctcagattgaa
ccaatcccaagtggaaatctgcctcctggttttgatccaagtacatgccgcagtgtgtat
gttggaaacatccatactcaggtgacagaacctcttctccaagaggttttttcaagtact
ggtcctgttgaaggctgcaagcttattaggaaggaaaagcagtcgtcatatggatttatt
cactatttcgatcgcagatctgccgctatggctatactttctcttaatgggaggcatcta
tttgggcagccaatcaaagttaattgggcatatgccagcgggcagagagaagatacatca
ggtcatttcaacatttttgttggagatctcagccccgaggttactgatgccacattgtat
gcatgcttttctgtttatcccagttgttcagatgcaagagttatgtgggatcaaaagact
gggcgctctagaggatttgggtttgtttccttcagaaaccagcaggatgcccaaagtgca
ataaatgacctaactggtaagtggcttggcagtagacagatacgatgcaactgggcgaca
aaaggtgctggttccaatgatgacaagcagagctctgatgctaaaagtgtggtggagtta
acaaatggctcttcagaagacggtaaagagacaacaaataacgaggctcctgagaataac
ctacaatatactactgtttatgttggaaatcttgctccagaggtcacacagcttgatctc
caccgccatttccatgctcttggtgctggagtgattgaagaggtccgggtccagcgagat
aaaggttttggttttgtcagatacagtactcatgccgaggcagctctggccatccagatg
gggaacacccagtcatatctgtatgggaagcagataaagtgttcttggggcagcaagcct
acaccacctggaacaagttcaaatccacttcccccacctgcagctgcacctttaccaggc
ctttcagcggctgaccttttagcttatgagcgacaactagctatgagcaagatgggtggt
gtccatgctgcccttatgcaccctcaaggacagcatcctctcaagcaggccgcaatggga
gtgggttctgctggagcaagccaggcaatatacgacggtgggttccagagtgttgctgcc
gcccagcaactcatgtactatcagtaa
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