Pistacia vera (pistachio): 116120285
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Entry
116120285 CDS
T07386
Name
(RefSeq) tRNase Z TRZ2, chloroplastic-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvy03016
]
116120285
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
116120285
Transfer RNA biogenesis [BR:
pvy03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
116120285
Prokaryotic type
116120285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
116120285
NCBI-ProteinID:
XP_031262099
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MQLSLPISPTKLPTIFPFHHPNISKPPTTCLQSHVSPVNSLKTSGYLSSISRAIDEEEEY
RKARAAVTRKGVDLEGYTIEGLSIGGHETCVIIPELKCAFDIGRCPSRAIQQNFVFITHA
HLDHIGGLPMYVASRGLYSLKPPTIFVPPCIKDDVEKLFDIHRSLGNVELDLDLVALDVG
ETYEMRNDIVVRPFKTHHVIPSQGYVIYSVRKKLKKQYIHLKGKQIEKLKKSGVAITDII
LSPEVAFTGDTTAEYMLNPRNADALRAKVLITEATFLDEGCSIEHARQHGHTHLSEIIQH
AEWIRNKAVLLTHFSSRYHVEDIRQAVLKLQSKVSAKVVPLTEGFKSMYA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaactttcgcttcccatttcacccacgaaactccccacaattttcccatttcaccac
cccaacatttcaaaaccaccaacaacttgtctccaatcccatgtcagtcccgtaaattca
ctgaaaacgtcggggtatttgtcgtccatcagccgagccatcgatgaagaagaagagtat
cggaaagctcgggcggctgtgacccggaaaggcgtcgacttggaaggctataccattgaa
ggactttcgataggtgggcacgaaacgtgcgtgataataccggaattgaagtgcgctttt
gatattgggaggtgccccagtagagctattcaacagaactttgtgtttatcactcatgct
catcttgaccatattggtgggttaccgatgtatgtagcgagtcgtggtttgtacagctta
aagccaccgacaatatttgtgcctccttgcattaaagatgatgtcgaaaaactgtttgac
attcaccggtccttggggaatgtggaactagaccttgatctggttgcgttagatgtgggt
gaaacttatgaaatgcggaatgatattgttgtccgaccgtttaaaactcaccatgtcata
ccaagccagggttatgtcatctactctgtgagaaaaaaacttaagaagcagtacattcat
ctgaaagggaagcaaattgagaagttgaagaagtctggtgttgcgattacagatatcata
ctgtctcctgaggtggcctttacaggagataccacggcagagtatatgcttaatccacgc
aatgcagatgcattgagagcaaaagttcttataactgaggcaactttcttggacgaaggc
tgtagcatcgagcatgcacgacaacatggtcatactcatttgtcagagattattcaacat
gctgagtggattcggaataaagcagtattgttaactcatttctcctcacgctaccatgta
gaggacatccgacaagctgttctgaagttgcaatccaaggtgtcagcaaaagtggtccct
ctaactgaaggttttaagtcaatgtatgcttag
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