Pistacia vera (pistachio): 116120488
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Entry
116120488 CDS
T07386
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00450
Selenocompound metabolism
pvy00970
Aminoacyl-tRNA biosynthesis
pvy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
116120488
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116120488
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvy01007
]
116120488
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvy03016
]
116120488
Enzymes [BR:
pvy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
116120488
Amino acid related enzymes [BR:
pvy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116120488
Transfer RNA biogenesis [BR:
pvy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116120488
Prokaryotic type
Other AARSs
116120488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
DUF3952
Motif
Other DBs
NCBI-GeneID:
116120488
NCBI-ProteinID:
XP_031262295
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MGSTGEDQTVPKLPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNA
IYVCGTDEYGTATETKAMEENCSPKEICDKYHAIHKEVYKWFNISFDDFGRTSTPQQTEV
CQEIFKKLLENNWLVENTMQQPYCDTCKRFLADRLVEGTCPTEGCNYESARGDQCENCGK
LLNATDLKDPKCKVCRNTPHIRDTNHLFLDLPALKDKLEEYINNMSVAGSWSQNAIQATY
AWLKEGLKVRCITRDLKWGVPVPHERFKEKVFYVWFDAPIGYVSITSCYTPEWEKWWKNP
ENVELFQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGVGVF
GNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAK
PTGQGYGSVVPDANGAKSHLLTKTLAEKVGKHVEQYIEAMEKVKLKQGLKTAMSISSEGN
AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFTVEVFKQLNLQPEKQV
SLCDEKGEIDRARRPWEIIPAGHKIGTPAPLFKELKDEEVEEFRKKFAGSQADRIIREEA
EAAKIAAQLKKTKVSDGSGKKQRPTKSASEAKPKTTVEPEISIARLDIRVGKITKVQKHP
DADSLYVEEIDVGEGQPRTVVSGLVKYIPLEEMQERMVCVLCNLKPAAMRGIKSHAMILC
ASSSDHTKVELVEPPKSAKIGERVTFPGFEGEPDDVLNPKKKVWETVQVDLHTDAQLVAH
YKDIPFTTSAGVCTVSSIQSGSIR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggggagcactggagaggatcagacggtccccaagcttccggttccggggaagcgtaac
atcctgataaccagcgccttgccttatgtcaacaacgttcctcacctcggcaacatcatc
ggctgcgtgttgagtgccgatgtgtttgctaggtattgtcgtcttagagggtacaatgct
atttacgtgtgcgggactgatgaatatggtactgccactgagactaaggccatggaagag
aattgctctcctaaagaaatttgtgacaagtatcatgcaattcataaggaagtctataaa
tggttcaacatcagttttgatgattttggacgtacatcaactccacagcagactgaagtg
tgccaagaaattttcaagaaactgttggagaacaactggcttgttgagaacacaatgcaa
cagccttattgtgatacatgcaaaaggttcttagctgacagactagtggagggtacctgt
ccaaccgaaggctgtaattacgagtctgctcggggagatcaatgtgaaaattgtggaaag
cttttgaatgcaacagacttgaaagatcctaaatgcaaggtctgtaggaacactccacat
attcgtgatacaaaccacttgtttcttgatcttcctgcgctaaaggataaattggaagag
tatatcaacaatatgtcagtggctggatcttggagtcaaaatgctattcaagcaacatat
gcatggcttaaagaagggctgaaagtaagatgcattaccagggatcttaagtggggggtt
ccagttcctcatgagagatttaaggaaaaggttttctatgtttggtttgatgcacctatt
gggtatgtctcaatcacttcatgctacacccctgagtgggagaagtggtggaagaatcct
gaaaatgtagagctgtttcaatttatgggaaaggataatgtgccatttcacacagtgatg
tttccttctacgcttcttgggactggtgaaaactggactttgatgaagactatcagtgtc
actgaatacttaaattatgaagctggcaaattttccaagagcaaaggtgtaggagttttt
ggtaatgatgcaaaggacacaaacattcctgtagaagtatggagatattacttgctaact
aataggcctgaggtatctgacacattatttacgtgggctgacttgcaagcgaaattgaac
agtgagttgctaaataatttgggcaacttcatcaatcgagttttgagtttcgttgctaaa
cctacaggtcaaggatatggttctgttgttcctgatgctaatggtgccaagtcgcatctg
ttgacaaagacattggctgaaaaagttggtaaacatgtggagcaatatatagaagccatg
gagaaggttaaactaaagcaagggctaaaaactgcaatgagcatttcaagtgaggggaat
gcatatcttcaagaaagccaattctggaagctttacaaggaagaccaaccttcttgttct
attgttatgagaacttcagtgggtctagtacatcttctagcatgtttgttagaaccattt
atgccgtcctttacggttgaggtatttaagcagcttaatttgcaacctgaaaagcaagtt
tccctttgtgatgaaaagggggaaattgatagggcaagaagaccttgggaaataatccct
gctggtcataaaattgggacgccagcaccattattcaaagaattgaaagacgaagaagtg
gaagaatttcggaagaagtttgctggaagtcaagctgataggattattagggaagaagcg
gaagctgctaaaattgctgcacaactgaagaaaacaaaagtttcagatggaagtggaaag
aaacaacggccaacaaaatctgcatctgaagccaaacctaagactactgttgaaccagaa
atttccattgcaaggcttgatatacgtgttggcaaaattacaaaagttcagaagcatcct
gatgctgattctttgtacgttgaagaaattgatgtgggtgaaggacagcctcggactgta
gttagtggccttgtcaagtatatacctcttgaagaaatgcaggagagaatggtctgtgtt
ctttgcaatttaaaaccagcagccatgcgaggaattaaatcacatgcaatgatcctctgt
gcttccagcagtgatcacaccaaggttgaattggttgagccaccaaagtcagcaaaaatt
ggagagagagttacattccctgggtttgagggcgagcctgatgatgtcttaaaccctaag
aaaaaggtctgggagacggtgcaagttgatctgcacacagatgcacaactggtggcccac
tataaagatattccgttcactacatcagctggtgtttgcactgtttcatccatccaaagc
gggtcaattaggtag
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