KEGG   Pistacia vera (pistachio): 116121030
Entry
116121030         CDS       T07386                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116121030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvy03019]
    116121030
Messenger RNA biogenesis [BR:pvy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116121030
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 116121030
NCBI-ProteinID: XP_031262849
LinkDB
Position
Unknown
AA seq 305 aa
MGLPAASESEDLSSKMEVDAFRRLFPLRYFERHLTESIRPDARPVGRARDTTVSLGAVAS
ADGSALAKIGSTTMLAAIKMEVMTPSLEAPDEGCVAIDFHMPPICSPIVRPGRPAEAAPV
VSKQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQ
IPVVSLDFEGKIVMVSDEQKVENLEKEAVNKERRKLTLSSIPFSLTCILHKNYILADPTA
EEESIMDTLVTVVLDSSSQLVSLYKPGGPVLAYTSAVQNCIALTRQRVKELQEILDEAIS
GMEID
NT seq 918 nt   +upstreamnt  +downstreamnt
atggggttgccagcggcttcagagtctgaggacttgtcatcaaagatggaggtggatgca
ttcagacgcctgttccctcttcgttatttcgagcgtcatttgaccgaatctatacgccca
gatgctaggcctgtgggaagagctagagatactactgtatcccttggtgctgttgcatct
gctgatggatcagcactagcgaagattggttcaactaccatgttggctgctatcaaaatg
gaagtcatgaccccgtccttggaggcaccagatgagggctgcgtagctattgatttccac
atgcctccaatttgttctccaatagttaggcctggcaggccagctgaggcagcaccagta
gtatcgaagcagttatctgacactattttaagttctggcatgattaatctgaaggaacta
tcattggtcagtggaaaagctgcatggatggcgtatttggacatatattgcttggatgct
gatggtgctctttttgatgctgcattactttcagcagttgctgctttctctcatttacaa
atccctgtggtttctctggattttgaaggaaaaattgttatggtgtctgacgaacagaag
gtagaaaacttggaaaaagaggcagttaataaggagagaaggaagcttacactgagcagt
attccattctcattgacatgcatacttcataagaattacatcctcgcagatccaactgct
gaggaagaatcaataatggacactcttgtgactgttgtcttagattcatccagtcaactt
gtgtctctatacaaaccaggtggaccagttcttgcctatacatcagctgttcagaattgc
attgcattaacaaggcagagagtaaaggaacttcaggagatcttagacgaagctatttct
ggtatggaaattgactga

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